Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00337 CTTACATATGATCATGTTAACTTCATTTTTTCTGGTGCCTCACATGCTCAGGAGTGTTCATACCCTTCAAGTTCAACTACAAACTTCTACAAATCTGGGCTATCTGAACCAGGGAGTACCTCGTACCATCAGGATAGTAATGGTTATGAGGTGAATTATTGTGAACAATTGATGGATGAGTATGGAAGGCACTCGGAAAACTCTGCAACAAGCAATGAACAGATAGCAACAGTATGTATAGAAAGGGAAGGAGTAAACAATGTCATACTAGAAAGTTCTATCGAATGTCCACGAAGGAATCATAATGGTTTCAATGATTATGAGGTCAGTTGGGAAGACAATATTGATCCTGACAACATGACCTATGAGGAACTACTTGAATTAGGTGAGGCAGTTGGAACTGAGAGTCGTGGTCTCTCCCAAGAACAAATCTCATCGATTCCAGTATCAAAGTATAAGTGTGGCCGCTTCTTCTTCTTTAGGAAGAAGTCACGGGAGGAGAGGTAA 507 0.4063 LTYDHVNFIFSGASHAQECSYPSSSTTNFYKSGLSEPGSTSYHQDSNGYEVNYCEQLMDEYGRHSENSATSNEQIATVCIEREGVNNVILESSIECPRRNHNGFNDYEVSWEDNIDPDNMTYEELLELGEAVGTESRGLSQEQISSIPVSKYKCGRFFFFRKKSREER* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00337 168 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 167 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00337 Lapu-Chr5 2800843 2802979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00337 1 166 C3H Transcription Factor Family AT3G63530 37.143 1.40e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00337 K19045 - gmx:100805963 218.009