Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu5g00332 | ATGGCAGAGGAACTTGACCTCGGCAACCTGAAGCCATTGAAAGTTTTAGGCAAAGGAGCCATGGGCACTGTGTTTCTTGTGCAACACAACTCCTGCCACGTCGCACTCAAAGTCGTCGACAAATCATCGTCCCTCCATGACGGTTCTCGCCGCGCCCTCTGGGAAATCAGCGTTCTCTCTCGCTTATCCCACCCTTTCCTCCCCACACTATTAGGCTCCTTCGAGTCCAACAACTTAATGGGCTGGGCCGTCCCCTACTGCCCCGGCGGCGACCTCAACCTCCTCCGCTACCGCCAAACAGATCACGTATTCTCCCCCGCCGTCATCCGCTTCTACCTCGCCGAGATCCTCTGCGCCCTCCACCATCTCCACTCCATGCACATCGCATATCGCGACCTCAAACCCGAAAACGTCCTCATCCAACAATCCGGCCACGTCACCCTCACCGACTTCGACCTCTCCCGAACCCTATCTCCCACCAAAACCAACACCTCTCCTTCCAACTCCGACATTCCTGACACCGCTCCGCGCAAACCCCGCCGCAACTTCCGCTGGGCTCCACTCACCAAGGCCCCCAAGTCCGCCCGAGTCACTCCCGCCGCTCGCCGCGCCGCGCTGAGCTTCGAGCGTTCGAACTCGTTCGTCGGCACCGAGGAGTACATCGCGCCGGAGGTCCTCCGAGGCGAGGGGCACGGCTTCGCCGTCGACTGGTGGGCCCTCGGCGTCCTCGCCCACGAGATGCTCTACGGAACGACGCCGTTCAAGGGGAAGAATCGCAAGGAAACGTTTCGCAACGTGTTGTTGAAGACGCCGGAGTTTGTTGGAAAGAAAACAGCGTTGACGGACCTAATCTCTCGGTTGCTCGAAAAGGACCCCTCCAAGCGTTTGGGTTATGTTCGTGGCGCCACCGAGATCAAGGAGCACGAGTTCTTCAGAGGGGTTAAGTGGGACCTACTAACGGAAGTTATGCGGCCGCCGTTTATTCCTTCAAGAGACGACGTTACCAAGCCTTTCGCCGATGGACTCGACATAAGGGGATACTTTCAGAGCTTGAAATCTCCGCCGTCTTTGCCCCCTTCGCCGTTACGGTCGCCGTCATTGGAGTTTCAGAAGAATGTTTCTTTACCGGAATTCTGA | 1137 | 0.5787 | MAEELDLGNLKPLKVLGKGAMGTVFLVQHNSCHVALKVVDKSSSLHDGSRRALWEISVLSRLSHPFLPTLLGSFESNNLMGWAVPYCPGGDLNLLRYRQTDHVFSPAVIRFYLAEILCALHHLHSMHIAYRDLKPENVLIQQSGHVTLTDFDLSRTLSPTKTNTSPSNSDIPDTAPRKPRRNFRWAPLTKAPKSARVTPAARRAALSFERSNSFVGTEEYIAPEVLRGEGHGFAVDWWALGVLAHEMLYGTTPFKGKNRKETFRNVLLKTPEFVGKKTALTDLISRLLEKDPSKRLGYVRGATEIKEHEFFRGVKWDLLTEVMRPPFIPSRDDVTKPFADGLDIRGYFQSLKSPPSLPPSPLRSPSLEFQKNVSLPEF* | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu5g00332 | 378 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 358 | IPR011009 | - | |
Lapu5g00332 | 378 | Gene3D | Phosphorylase Kinase; domain 1 | 11 | 90 | - | - | |
Lapu5g00332 | 378 | MobiDBLite | consensus disorder prediction | 157 | 182 | - | - | |
Lapu5g00332 | 378 | FunFam | Serine/threonine-protein kinase OXI1 | 209 | 330 | - | - | |
Lapu5g00332 | 378 | MobiDBLite | consensus disorder prediction | 157 | 172 | - | - | |
Lapu5g00332 | 378 | Gene3D | Transferase(Phosphotransferase) domain 1 | 91 | 163 | - | - | |
Lapu5g00332 | 378 | SMART | serkin_6 | 10 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu5g00332 | 378 | Pfam | Protein kinase domain | 211 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu5g00332 | 378 | Pfam | Protein kinase domain | 13 | 165 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu5g00332 | 378 | ProSiteProfiles | Protein kinase domain profile. | 10 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu5g00332 | 378 | ProSitePatterns | Protein kinases ATP-binding region signature. | 16 | 37 | IPR017441 | GO:0005524 | |
Lapu5g00332 | 378 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 128 | 140 | IPR008271 | GO:0004672|GO:0006468 | |
Lapu5g00332 | 378 | PANTHER | FLIPPASE KINASE 1-RELATED | 4 | 332 | - | - | |
Lapu5g00332 | 378 | FunFam | Serine/threonine-protein kinase OXI1 | 91 | 159 | - | - | |
Lapu5g00332 | 378 | Gene3D | Transferase(Phosphotransferase) domain 1 | 208 | 330 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu5g00332 | Lapu-Chr5 | 2757334 | 2758742 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu5g00332 | 3 | 378 | AGC Kinase Gene Family | AT3G20830 | 58.750 | 7.59e-145 | 415 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_RSK-2 | Lapu5g00332 | Pkinase | 1.7e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu5g00332 | - | - | gmx:100802613 | 560.451 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu5g00332 | 5 | 2757334 | 2758742 | Lapu5g00332 | 5 | 2757334 | 2758742 | ECH | |
Lapu5g00332 | 5 | 2757334 | 2758742 | Lapu11g00638 | 11 | 9545519 | 9547192 | PCT |