Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00332 ATGGCAGAGGAACTTGACCTCGGCAACCTGAAGCCATTGAAAGTTTTAGGCAAAGGAGCCATGGGCACTGTGTTTCTTGTGCAACACAACTCCTGCCACGTCGCACTCAAAGTCGTCGACAAATCATCGTCCCTCCATGACGGTTCTCGCCGCGCCCTCTGGGAAATCAGCGTTCTCTCTCGCTTATCCCACCCTTTCCTCCCCACACTATTAGGCTCCTTCGAGTCCAACAACTTAATGGGCTGGGCCGTCCCCTACTGCCCCGGCGGCGACCTCAACCTCCTCCGCTACCGCCAAACAGATCACGTATTCTCCCCCGCCGTCATCCGCTTCTACCTCGCCGAGATCCTCTGCGCCCTCCACCATCTCCACTCCATGCACATCGCATATCGCGACCTCAAACCCGAAAACGTCCTCATCCAACAATCCGGCCACGTCACCCTCACCGACTTCGACCTCTCCCGAACCCTATCTCCCACCAAAACCAACACCTCTCCTTCCAACTCCGACATTCCTGACACCGCTCCGCGCAAACCCCGCCGCAACTTCCGCTGGGCTCCACTCACCAAGGCCCCCAAGTCCGCCCGAGTCACTCCCGCCGCTCGCCGCGCCGCGCTGAGCTTCGAGCGTTCGAACTCGTTCGTCGGCACCGAGGAGTACATCGCGCCGGAGGTCCTCCGAGGCGAGGGGCACGGCTTCGCCGTCGACTGGTGGGCCCTCGGCGTCCTCGCCCACGAGATGCTCTACGGAACGACGCCGTTCAAGGGGAAGAATCGCAAGGAAACGTTTCGCAACGTGTTGTTGAAGACGCCGGAGTTTGTTGGAAAGAAAACAGCGTTGACGGACCTAATCTCTCGGTTGCTCGAAAAGGACCCCTCCAAGCGTTTGGGTTATGTTCGTGGCGCCACCGAGATCAAGGAGCACGAGTTCTTCAGAGGGGTTAAGTGGGACCTACTAACGGAAGTTATGCGGCCGCCGTTTATTCCTTCAAGAGACGACGTTACCAAGCCTTTCGCCGATGGACTCGACATAAGGGGATACTTTCAGAGCTTGAAATCTCCGCCGTCTTTGCCCCCTTCGCCGTTACGGTCGCCGTCATTGGAGTTTCAGAAGAATGTTTCTTTACCGGAATTCTGA 1137 0.5787 MAEELDLGNLKPLKVLGKGAMGTVFLVQHNSCHVALKVVDKSSSLHDGSRRALWEISVLSRLSHPFLPTLLGSFESNNLMGWAVPYCPGGDLNLLRYRQTDHVFSPAVIRFYLAEILCALHHLHSMHIAYRDLKPENVLIQQSGHVTLTDFDLSRTLSPTKTNTSPSNSDIPDTAPRKPRRNFRWAPLTKAPKSARVTPAARRAALSFERSNSFVGTEEYIAPEVLRGEGHGFAVDWWALGVLAHEMLYGTTPFKGKNRKETFRNVLLKTPEFVGKKTALTDLISRLLEKDPSKRLGYVRGATEIKEHEFFRGVKWDLLTEVMRPPFIPSRDDVTKPFADGLDIRGYFQSLKSPPSLPPSPLRSPSLEFQKNVSLPEF* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00332 378 SUPERFAMILY Protein kinase-like (PK-like) 8 358 IPR011009 -
Lapu5g00332 378 Gene3D Phosphorylase Kinase; domain 1 11 90 - -
Lapu5g00332 378 MobiDBLite consensus disorder prediction 157 182 - -
Lapu5g00332 378 FunFam Serine/threonine-protein kinase OXI1 209 330 - -
Lapu5g00332 378 MobiDBLite consensus disorder prediction 157 172 - -
Lapu5g00332 378 Gene3D Transferase(Phosphotransferase) domain 1 91 163 - -
Lapu5g00332 378 SMART serkin_6 10 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00332 378 Pfam Protein kinase domain 211 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00332 378 Pfam Protein kinase domain 13 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00332 378 ProSiteProfiles Protein kinase domain profile. 10 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00332 378 ProSitePatterns Protein kinases ATP-binding region signature. 16 37 IPR017441 GO:0005524
Lapu5g00332 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Lapu5g00332 378 PANTHER FLIPPASE KINASE 1-RELATED 4 332 - -
Lapu5g00332 378 FunFam Serine/threonine-protein kinase OXI1 91 159 - -
Lapu5g00332 378 Gene3D Transferase(Phosphotransferase) domain 1 208 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00332 Lapu-Chr5 2757334 2758742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00332 3 378 AGC Kinase Gene Family AT3G20830 58.750 7.59e-145 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu5g00332 Pkinase 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00332 - - gmx:100802613 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00332 5 2757334 2758742 Lapu5g00332 5 2757334 2758742 ECH
Lapu5g00332 5 2757334 2758742 Lapu11g00638 11 9545519 9547192 PCT