Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00321 ATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGTTCAAATAATACTTATTATGTCGGCGGGCTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAAATTTGCAAATAGTAGTGATTTGCCAGTGTTTCCTTACACCAAGAGTTTGTTTCCCTTGCAAACTAAGTTCCAGAAGAAGGAGCCTAAAGAACTGGGTGAATTGCCCGGAGTGCAATTTCCCAATTTGCCAACTTTGAATAGCTATTTAAAGCATTGGGGAACTCATCCAGTCACTCAGAACAGAACTCTTTACACTTGGATAAATGAAGGAGGGACAGTGGGTGGCAAGAGGACATATGAAGAACAACACTTAAATGCTTCTTGTATTGCACATAAGCTCTTAACAAGTAAAAAGCCAGTGATCAAGCCCGGTGACAGGGTTCTCCTAATCTATGTTCCTGGTCTAGATTTCATCGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTACCAGTCCCAGTTCTTCCCCCGGATCCCATGCAAAGAGGTGGACAAGCACTTCTAAAAATTGAGAACATTGCCAAGTCATGTGGCATAGTGGCGATCTTATCAACAGTGGCTTATCATTCAGCAGTACGTGCAGGTAAAGTTAAAAGTTTGATCTCATTAACTGGAAAAATGGGGAAATCCGCAGCTCAGTGGCCTAAACTTCCTTGGCTGCACACTGATACTTGGGTCAATAATAACTCGAGAAATTTGGCTTTGGAAGATGTAGATGATCAATGTGAATCAAAGCCTGGTGATATATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACACGGAGGGCTCATTCACAATGTGAAGTTGATGAAAAGTATATACAAGAGCACCTCAAGGACAATGCTAGTGAGTTGGCTTCCTCAGTATCATGATATGGGGCTGATTGAAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTTCTTTTCTCGCCAATGACATTTATTAAGAAACCACTCTTATGGCTTGAAACCATAAGCAAGTATCAAGCAACTCACAGTGCTGGCCCCAACTTCGCTTTTGAGTTGGTGGTTCGAAGGTTAGAATCTGAAAAGGACAAGCTTTTGGATTTGAACCTTTCATCCATGATTTTTCTCATGGTTGCCGCTGAGCCAGTCAGACTGAAGACCTTGAAAAGATTTCTTGATTTAACTGCTTCTTTTGGCTTATCTCAGAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGTGAAGGATGTCCTATTCTTGTTGACTGGCAGGGAAGAGTTTCTTGTGGATATATTCGCCCTGGTGATGTAGATATTGACATTAGAATAGTTGATCCAGAGAGTGGTGAAGAGCTTCAAGAAGATGGAAAGTGTTAA 1479 0.4145 MRNGFYEKLESELQGSNNTYYVGGLMAFELTERNSSYAMALICKKFANSSDLPVFPYTKSLFPLQTKFQKKEPKELGELPGVQFPNLPTLNSYLKHWGTHPVTQNRTLYTWINEGGTVGGKRTYEEQHLNASCIAHKLLTSKKPVIKPGDRVLLIYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGKVKSLISLTGKMGKSAAQWPKLPWLHTDTWVNNNSRNLALEDVDDQCESKPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMKSIYKSTSRTMLVSWLPQYHDMGLIEGLFTALVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFELVVRRLESEKDKLLDLNLSSMIFLMVAAEPVRLKTLKRFLDLTASFGLSQKVMAPGYGLAENCVFVSCAFGEGCPILVDWQGRVSCGYIRPGDVDIDIRIVDPESGEELQEDGKC* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00321 492 ProSitePatterns Putative AMP-binding domain signature. 277 288 IPR020845 -
Lapu5g00321 492 Gene3D - 1 47 IPR036188 -
Lapu5g00321 492 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 14 491 - -
Lapu5g00321 492 Gene3D - 78 491 IPR042099 -
Lapu5g00321 492 SUPERFAMILY Acetyl-CoA synthetase-like 89 487 - -
Lapu5g00321 492 Pfam AMP-binding enzyme 118 487 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00321 Lapu-Chr5 2661774 2663368 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00321 116 473 Monolignol Biosynthesis Gene Families AT1G65060 24.021 1.05e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00321 - - vun:114184777 924.85