Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00319 ATGGATCCAGAAAAATCAGTAGAGGATCAATTCTCCAAGCTACATCCTTCCATGCCAGTAAACACCAAAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTGGTCAGGCTTGGATATAATAATGTCACTGTCATAGAGAAACATCATTCAGTTGGGGGCATGTGTGAGTCTGTAAACATTGAAGGAAGAGTTTATGATCTTGGTGGCCAAGTTCTGGCTGCTAGCAGCGCTCCAGTCATCTTTCACTTGGCAAAAGAGACAGGTTCTCCACTAGAAGAAATGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTCGGGACAATACCAAGATATCAAAGTTGCTGATGATTATGTATCTGTCATGTCACTTACATTAGCCATCCAAGAAAAGGTGAAGCATTCTGGTCGTTTAGGGGTTCATGCTGTCAGTGAAGTTGCTTCAGACTTAGCTCCAGAATATCTGGAGCATCACGGACTTAAATCTGTCCCTAAATCTGTAGCTTATGGTTACACTGCTTCAGGATATGGGTTTATTCAAGATATGCCTTATGCCTACATTCATGAATTTACCAGAACTTCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGTCTTTGGCAGAGGATTGCTGAATCACTTCCTATAAAACTTCACTGTAACACTGAGGTGTTCACAATCAAGAGGAACTCTGACAGTGTAACCGTTAATGTCAAGTGCTCAAATGAAATTGAAACTATGAAATTTGATAAGATCATAATCTCGGGTAACTTTCCACTAAAATACGGAAGAACTTATAGATCAGTGCCTTCAACTAGCTTTGAGTATGAATCAGAAGTAATGGATGTAAGTGAACTTGAAAAGGATTTGTTCAGCAAAGTTGAAACAAATGACTACTACACAACTGTTTTAAAGATAAAGGGATTGGAACATATGCCTGTTGGATTTTATTATTTTAGAGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTTTATGCAGACAGTAATATATTCTTGTTCTGGTCCTATGGCAACTCTGCTGATATTAAGGGACCAACAATCACCGAGCTTGCAATCAAATCGATAAAGTCCATGGGGGGAGAAGTTGAGAGTTTCATTCTTCAACGTCGTTTTAAGTATTTTCCTCACGTGAGCAGCCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGTTCAAATAATACTTATTATGTCGGCGGGCTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAAATTTGCAAATAGTAGTGATTTGCCAGTGTTTCCTTACACCAAGAGTTTGTTTCCCTTGCAAACTAAGTTCCAGAAGAAGGAGCCTAAAGAACTAGGTGAATTGCCCGGAGTGCAATTTCCCAATTTGCCAACTTTGAATAGCTATTTAAAGCATTGGGGAACTCATCCAGTCACTCAGAACAGAACTCTTTACACTTGGATAAATGAAGGAGGGACAGTGGGTGGCAAGAGGACATATGAAGAACAACACTTAAATGCTTCTTGTATTGCACATAAGCTCTTAACAAGTAAAAAGCCAGTGATCAAGCCCGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGTCTAGATTTCATCGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTACCAGTCCCAGTTCTTCCCCCGGATCCCATGCAAAGAGGTGGACAAGCACTTCTAAAAATTGAGAACATTGCCAAGTCATGTGGCATAGTGGCGATTTTATCAACAGTGGCTTATCATTCAGCAGTACGTGCAGGTAAAGTTAAAAGTTTGATCTCATTAACTGGAAAAATGGGGAAATCCGCAGCTCAGTGGCCTAAACTTCCTTGGCTGCACACTGATACTTGGGTCAATAATAACTCGAGAAATTTGGCTTTGGAAGATGTAGATGATCAATGTGAATCAAAGCCTGGTGATATATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACACGGAGGGCTCATTCACAATGTGAAGTTGATGAAAAGTATATACAAGAGCACCTCAAGGACAATGCTAGTGAGTTGGCTTCCTCAGTATCATGATATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTTCTTTTCTCACCAATGACATTTATTAAGAAACCACTCTTATGGCTTGAAACCATAAGCAAGTATCAAGCAACTCACAGTGCTGGCCCCAACTTCGCTTTTGAGTTGGTGGTTCGAAGGTTAGAATCTGAAAAGGACAAGCTTTTGGATTTGAACCTTTCATCCATGATTTTTCTCATGGTTGCCGCTGAGCCAGTCAGACTGAAGACCTTGAAAAGATTTCTTGATTTAACTGCTTCTTTTGGCTTATCTCAGAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGTGAAGGATGTCCTATTCTTGTTGACTGGCAGGGAAGAGTTTCTTGTGGATATATTCGCCCTGGTGATGTAGATATTGACATTAGAATAGTTGATCCAGAGAGTGGTGAAGAGCTTCAAGAAGATGGAAAGGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCAGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATGAGCTTCAGAACCATCTTGGACGAAACTACACAAGAACTGGAGACCTGGGAAGAATAATTGATGGGAAGCTATTCATCACCGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAAAAAACAGTTGAGAGTTCATCTGAATTTCTTCGTCCTGGGTGTTGTGCAGTCATTGGTGTCCCTGAGGAGGTGTTATCAGCAAAGGGGATTACCCTGCCAGATGGATCTGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGGTAAAACGGTGAGCAAAGATGTGATTGAGCATATTCAGACTCGTGTGGCAGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTTGCAGATGAAACACTGAACTTGGTGCCTCAACCTATTCAGACAAGGAAAACACTGTTAAGGTCATTTACTACAGGAACATGCAGAGAAGGAAGAACACCCCGGGCCCAGCTGGTGAGAAGTAGTAATCCTCAACCTATTCCAAGAATCAGTAACAAGGAAATTGTGGGACACTTGAAAAAGCTTATTTCTGAGCAATCAGGAATCCCAATCAAAGATATCTCAGTCGCAGACAACATGTCAACCTATGGAATTGATTCAATTGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCTTGGGTGTGCCAGTTGCAGCTATTGATGTCTTCACTGCATCATGCATTCAAGAATTGGCTAACTTTTCCGAGAATCTTATGTTAAAGTCTCAACTTATGAGCAATTCATCCCATGCTCCAGTAGCTGAAATTGACACCACCGAAGTGGCTGTGGATGTGTCCAAGTCTCGCCAATGGGTTGATATCACAGACCCGTCTCTGGTTTCCATTGGAGATGAAGTTGCCATTGCTGAAGGGGTTTTGGTACAAAGCCATGAGGTGAAGAATGGAATTCTAAGTCTCCTACCTATTAGGATAGGTAAAAATTCTTCAATTGGGCCTTATTCTACTATTCAAAAAGGAAGTGTTATTAAAGAAGGATCCGAAGTAGAACCCCTGCAAAAGGTTGAAGAAGGCCAATATGTGGCCAAACCTGCTAAGCTTAATAATGTTAAAGAGAATGCAGTGTTGCTTGTTACAACCAGCAAAACTCAGTCTAAAGCCATGTACCATTTTCTGGGGATCTATCTTACTGGATTTCTCAGCTCCCTTGCTGCAGCCATTGCTTACATCCTGTACATATGGTTCTTCCAGATACCTGCATCATTCCAACACTTTTCTTTTCTTTGCATATGTGGGGCATTCCATTGGATCCCATTTACCATTGTTGCGTATGCCACCATGTTTTCTGATATCCCAACAAATCCCATTGCCTTTACCATTTCATTTACCTGCGCGTACTTGCTTCATGGTCTCGTACTCACCTCTCTCACCTGCGCCTTGACCCGTTTGCTCAAATTCAGTCCAAACCAAACCCATTTTAAAACCTGGCTTAGACATCAATTGATCATCTCCTGCCATCAAAGATTTACCAAGCTTCTCTCGGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCACTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCCGAGTTAATGTCAATAGGTGATGGAGTCCATCTTGGTGATTTTAGCAAGATAATCACTGGCTTCCACTATTCAAACGGATATGCTTGTGGAAAAATAGAGGTTCAGGATAATTCAGTTGTTGGGAGTCAAAGCCTAATCCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTGTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATACTCCATGAGGGTAGCGTGTATATTGGATCTCAAAACCGAGTGGCAATGAGGAACTCTTCAAGTTCTTTAGATGAACGGATAGAGGAGATGAACACGGAATACAAGAAAGTAGTTGCAAATATGGCTGCAAATTTAGCTGCAACAACTATCAATGTCAAAGCAAGATATTTCCACCGCATTGGTGTTAGTGGAAAGGGGCACTTGAAAATCTATGACAAACTTGAGGGCATTCCACTGCACAAGGTTTTTCAACCTGGTAAAAGGTATCCCGTCATGGTAAGACACAGTAACAGCTTGAGTGCTGATGATGATGCTAGGATCGATGCACGTGGTGCAGCTTTGAGGATTCTTTCTGGTGCACCTGATTCTGACCATGTTCCCCTCATTGACCTGACATTAAAAACTGGCAATGCGTTTTATGCTCGCACTCTTGCTGATTTTGCAAGCTGGCTTGTTTGTGGACTTGCTGCGAGAGAGGAACTTGTCAAGCGTACCCCACATGTTCGTGAAGCAGTGTGGAATTCACTTAGACATGCTCACTCATTTGCTGAATTGCATTACTACTCAAACATTTGCAGGCTCATGCGCTTCACTGATGGACAAGAAATGTACGTGAAGTTTAAGCTAAGGCCTATTGACACAAGCATTAGTGAGGACACAGGTAAGGTTAAACCAACTGGGATTCTTCCACCGGAAACAGGTGCAATTCCAAGGGATGAAAATGATACACGTCCCTTACTTTTCCTTGCTGAAGATTTTCAACGGCGCGTGAGTTCCCCCGGTGGGGTTCGCTATGTCTTCCAAGTGCAACTTCGAGCAGTGCCAGAAGATGAAGCTACACGTGACATTGCACTGGACTGCACCAAACCATGGAATGAAAGTGAGTTCCCTTACATTGATGTTGGAGATATAAACGTCACTGAGAATCTCTCTAGGGAAGAATCAGACAGCCTTGAATTTAACCCCTATCTCAAAAGCCATGAGTTGGATGTGATCCCTGCCAACTCCAACACCCAAAGTGCCTCAATCGATCATGGCCGTTCATTGATCTACGAGATTTGCCAGCACGTGCGTAATAGACAGCCACTCCCAGTCTCTTGGAGAAACCTCGTAGAACAATCTAATGTTAAGGTAGACTTGTCCTGCTGCCCTGTAGCAGCATCAGTAGCAACATCAAAGCCCAAAAAGGAGACAAAATTGATGACAACCTTAACCCTGACAAGAACCTGGTACCAGACATTCTCGGCAGTTTTCACTCAACCCTTGCTACAAACGGTTTTGCCTTACACGGTGGTGGGTTTGTCCGTTTTTGCCCCTTTGAACTTTGTGGTGAACATGAAGAACGCTGAGAAACTCTCAGTGCAATGGTTGCTTGCTTTGTGTTGGATTCTCTCGGGTGTTATGGGTGCACTGGCATGCGTTGTGGCCAAATGGATTCTGGTGGGAAGGAAGAGAGAGGGTGAAACAGTAGCCTTGTGGAGCAAAAGGGTCATCATGGATAGCACGTGGCAAGCCATTAGAACGTTGGTTGGGGACTACTTCATGGACATGGCAAGTGGGTCGTTTTTGTTTGTGATGTGGATGAGGTTGATGGGTGCAGAGATAGAGATGGATGGTGATGCTTACGTCGACAGCATGGGGGCATTGTTGAACCCCGAAATGGTGACGATTGAAAGAGGAGGTTGCGTGGGAAGAGAAGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGAGGAATCAAAATTGGTGAAGATGGGTTTGTGGGAAGTAGAGCTGTGGTCATGCCTGGTGTGCATGTGGAGAATGAAGCCAGTCTCTCTGTCTTGTCTCTTGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA 6561 0.4274 MDPEKSVEDQFSKLHPSMPVNTKIGIVGAGPSGLSAAYALVRLGYNNVTVIEKHHSVGGMCESVNIEGRVYDLGGQVLAASSAPVIFHLAKETGSPLEEMDSHKLAVIDSSSGQYQDIKVADDYVSVMSLTLAIQEKVKHSGRLGVHAVSEVASDLAPEYLEHHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHCNTEVFTIKRNSDSVTVNVKCSNEIETMKFDKIIISGNFPLKYGRTYRSVPSTSFEYESEVMDVSELEKDLFSKVETNDYYTTVLKIKGLEHMPVGFYYFREYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSADIKGPTITELAIKSIKSMGGEVESFILQRRFKYFPHVSSQDMRNGFYEKLESELQGSNNTYYVGGLMAFELTERNSSYAMALICKKFANSSDLPVFPYTKSLFPLQTKFQKKEPKELGELPGVQFPNLPTLNSYLKHWGTHPVTQNRTLYTWINEGGTVGGKRTYEEQHLNASCIAHKLLTSKKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGKVKSLISLTGKMGKSAAQWPKLPWLHTDTWVNNNSRNLALEDVDDQCESKPGDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMKSIYKSTSRTMLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFELVVRRLESEKDKLLDLNLSSMIFLMVAAEPVRLKTLKRFLDLTASFGLSQKVMAPGYGLAENCVFVSCAFGEGCPILVDWQGRVSCGYIRPGDVDIDIRIVDPESGEELQEDGKEGEIWISSPSAGIGYWGKEELSQKTFRNELQNHLGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVIGVPEEVLSAKGITLPDGSDQVGLVVVAEVRDGKTVSKDVIEHIQTRVAEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADETLNLVPQPIQTRKTLLRSFTTGTCREGRTPRAQLVRSSNPQPIPRISNKEIVGHLKKLISEQSGIPIKDISVADNMSTYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASCIQELANFSENLMLKSQLMSNSSHAPVAEIDTTEVAVDVSKSRQWVDITDPSLVSIGDEVAIAEGVLVQSHEVKNGILSLLPIRIGKNSSIGPYSTIQKGSVIKEGSEVEPLQKVEEGQYVAKPAKLNNVKENAVLLVTTSKTQSKAMYHFLGIYLTGFLSSLAAAIAYILYIWFFQIPASFQHFSFLCICGAFHWIPFTIVAYATMFSDIPTNPIAFTISFTCAYLLHGLVLTSLTCALTRLLKFSPNQTHFKTWLRHQLIISCHQRFTKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHYSNGYACGKIEVQDNSVVGSQSLILPGSVVEKNVIVGALSVAPMNSILHEGSVYIGSQNRVAMRNSSSSLDERIEEMNTEYKKVVANMAANLAATTINVKARYFHRIGVSGKGHLKIYDKLEGIPLHKVFQPGKRYPVMVRHSNSLSADDDARIDARGAALRILSGAPDSDHVPLIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKRTPHVREAVWNSLRHAHSFAELHYYSNICRLMRFTDGQEMYVKFKLRPIDTSISEDTGKVKPTGILPPETGAIPRDENDTRPLLFLAEDFQRRVSSPGGVRYVFQVQLRAVPEDEATRDIALDCTKPWNESEFPYIDVGDINVTENLSREESDSLEFNPYLKSHELDVIPANSNTQSASIDHGRSLIYEICQHVRNRQPLPVSWRNLVEQSNVKVDLSCCPVAASVATSKPKKETKLMTTLTLTRTWYQTFSAVFTQPLLQTVLPYTVVGLSVFAPLNFVVNMKNAEKLSVQWLLALCWILSGVMGALACVVAKWILVGRKREGETVALWSKRVIMDSTWQAIRTLVGDYFMDMASGSFLFVMWMRLMGAEIEMDGDAYVDSMGALLNPEMVTIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVVMPGVHVENEASLSVLSLAMKGEIVRSR* 2187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00319 2186 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 132 1936 - -
Lapu5g00319 2186 SUPERFAMILY Heme-dependent catalase-like 1583 1917 IPR020835 GO:0020037
Lapu5g00319 2186 Pfam AMP-binding enzyme 522 959 IPR000873 -
Lapu5g00319 2186 Gene3D Hexapeptide repeat proteins 2043 2176 - -
Lapu5g00319 2186 SUPERFAMILY Trimeric LpxA-like enzymes 2032 2179 IPR011004 -
Lapu5g00319 2186 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Lapu5g00319 2186 SUPERFAMILY Trimeric LpxA-like enzymes 1230 1293 IPR011004 -
Lapu5g00319 2186 Gene3D Catalase core domain 1572 1925 - -
Lapu5g00319 2186 PRINTS Adrenodoxin reductase family signature 47 60 - -
Lapu5g00319 2186 PRINTS Adrenodoxin reductase family signature 23 45 - -
Lapu5g00319 2186 Gene3D Hexapeptide repeat proteins 1201 1334 - -
Lapu5g00319 2186 Gene3D Hexapeptide repeat proteins 1438 1571 - -
Lapu5g00319 2186 Gene3D - 954 1082 IPR045851 -
Lapu5g00319 2186 Gene3D - 482 953 IPR042099 -
Lapu5g00319 2186 ProSiteProfiles catalase family profile. 1544 2186 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lapu5g00319 2186 SUPERFAMILY FAD/NAD(P)-binding domain 18 271 IPR036188 -
Lapu5g00319 2186 Pfam Phosphopantetheine attachment site 1129 1192 IPR009081 -
Lapu5g00319 2186 ProSiteProfiles Carrier protein (CP) domain profile. 1123 1197 IPR009081 -
Lapu5g00319 2186 Gene3D - 1112 1196 IPR036736 -
Lapu5g00319 2186 SUPERFAMILY Trimeric LpxA-like enzymes 1468 1575 IPR011004 -
Lapu5g00319 2186 Gene3D - 23 446 IPR036188 -
Lapu5g00319 2186 Gene3D - 303 396 - -
Lapu5g00319 2186 SUPERFAMILY Acetyl-CoA synthetase-like 493 1079 - -
Lapu5g00319 2186 ProSitePatterns Putative AMP-binding domain signature. 681 692 IPR020845 -
Lapu5g00319 2186 Gene3D - 94 202 - -
Lapu5g00319 2186 ProSitePatterns Phosphopantetheine attachment site. 1152 1167 IPR006162 -
Lapu5g00319 2186 CDD FAAL 499 1073 IPR040097 GO:0008610
Lapu5g00319 2186 SUPERFAMILY ACP-like 1120 1200 IPR036736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00319 Lapu-Chr5 2629044 2636903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00319 657 1070 Monolignol Biosynthesis Gene Families AT4G05160 24.590 2.25e-19 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00319 - - lja:Lj0g3v0205559.1 2110.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00319 5 2629044 2636903 Lapu5g00319 5 2629044 2636903 ECH
Lapu5g00319 5 2629044 2636903 Lapu11g00647 11 9645352 9652466 PCT