Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00293 ATGGATCACGAATCTGGCCAGGGATTTGATTCAGATGATAGTGACCTTGATATGCAAGCAGAAATTAGTGAGAAACACGGGAAAATAGATGAATTTTCAAAAAACCTAGAATTATGTGGAAGTGAAGATGAGAAGTTTGTCGAACAACCTGCAGCAGAAATTTCAATAGATATAGAAGCTGTTGAACCATTGATAGGCATGGAGTTCAATTCAAGAGAGGAAGCGAGAGAATTCTACATTGCCTATGGTAGGCGAATAGGGTTTACAGTACGAATACACCATAACCGCCGTTCACGAGTGAATAACCAGGTCATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGTGCAAAAAAGTATGTACACAGAAAAGATAGAGTGCTGCCTCCTCCACCAGCCACTCGTGAAGGTTGTCAGGCCATGATAAGGCTGGCTGTACGGGATGGAGGGAAGTGGGTTGTCACCAAATTTGTAAAGGAGCATACTCATAAGCTAATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGGTTAGCGAGGATGAGAAGGATAAGAGAATCCGTGAGCTATCACTTGAGTTGTACAATGAGAGGCAAAAGTGCAAACGACGTTGTGCTGCATATGAAGAGCAGTTAAATATGATTCTGAATGATTTAGAAAAGCACACAGAACATATTTCTGAAAAAGTTGCTGCTGTAGTACGAAGTATAAGAGAGATAGAGGAGGAAAAATCAGATTCAGATGGTGGGTAA 765 0.417 MDHESGQGFDSDDSDLDMQAEISEKHGKIDEFSKNLELCGSEDEKFVEQPAAEISIDIEAVEPLIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLAVRDGGKWVVTKFVKEHTHKLMSPSKVPWRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKVAAVVRSIREIEEEKSDSDGG* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00293 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 247 - -
Lapu5g00293 254 Coils Coil 202 229 - -
Lapu5g00293 254 MobiDBLite consensus disorder prediction 1 28 - -
Lapu5g00293 254 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00293 Lapu-Chr5 2398737 2403150 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu5g00293 FAR1 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00293 - - gmx:100813124 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00293 5 2398737 2403150 Lapu5g00293 5 2398737 2403150 ECH