Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00291 ATGAACCTATGGCCAGTTCGATTTGGGACTCTATTTGAGGTTGTGGTTTTCTCATGCTTGTGGTTGCAAGTTTCAAGTCTTGGCTCCATGTCTTCCATTGCCGTCTCTTATGGCGACAAAGGGTCTGCGTTTTGTGGCTTGAAATCGGATGGATCTCACACTGTAAACTGTTATGGGATGAACTCAGCCATAATTTATGGAACACCGACACATTTTCCATTTTTTGGTCTAACCGCCGGTGATGGCTTTGTGTGTGGGCTTTTAATGAGTTCTAGTCAACCGTATTGCTGGGGTAGCAGTAGCCATGTTGAAATGGGTGTGCCACAACCTATGGTTAAGGGAGCTCAGTACCTAGAGATCAGTGCTGGGGATTATCACGTTTGTGGATTGAGGAAACCATTGACTGGAAGACACAGAAACACTTCTTTGGTTGATTGTTGGGGCTACAACATGACAAATAACTATGTGTTCGATGGGCAGGTTCAATCCATCTCAGCAGGTTCTCAATTCAATTGTGGATTGTTTTCTCAGAACAGAAGTGTGTTTTGCTGGGGGGACGAGACAAGTAGCCAAGTTATTAACATGGTCCCTAAAGGCATGAGGTTCCAGAAGATCTCTGCTGGAGGCTATCATGTGTGTGGAATCTTAGAAGGGGTGAATTCTAGAGCTGTTTGTTGGGGGAGGAGCTTGCTGGATTTGGGGGAAGAACTTTCAATTTCATTGACGCGTTCAGGACAAGGACAAGGTAACGTTGAGTCGGTTCCCAATGATCCCATGCTTTCTGTGGTGGGAGGGAAGTTCCATGCATGTGGCATTAAGAGCTATGACCGTGGAGTGGTTTGTTGGGGCTATACTTTCAAAGCAGGCACCCGAGTTCCTAGTGGGATTAAGGCCTTTGAGATTGGTGCTGGAAATTATTTTACCTGTGGAGTACTTGTTGAGAAATCTCATATGCCTGTTTGTTGGGGTGTTGGCTTCCCTACTTCTCTCCCTTTGCCTGTCTCACCAAGAATGTGTAGGTCTACTCCTTGTCCTCCAGATTACTACGAAACCTCACAAAATGGTCTTTGCAAGTCACCAGATTTCCATGTTTGCATGCCATGCAGTGATGCTTGTCCTCCTGAGATGTATAAGAGAAATGGATGCAATTTGAAATCTGACATACTATGTGAATATAATTGTTCTCTGTGTTCATCTCCAGAATGCCTCTCCAATTGCTCCTCTTCCTATTCCAATGCCGCCTCTGGCAAGAGAAGTGAAAGATTTTGGTCTCTTCAACTGCCCGTGATTATTGCTGAGATAGCTTTTGCCGTTTTCTTTGTTTGTATTGTGTCTATAACTGCTGTGTTGTATGTTCGCTACAAGCTACGAGATTGTCAGTGTTCTTCTTCAGCGAGAGGGTCAAAGGGGAAGAAACTAAAAGGGAGTTCCTCACACCAAAAGGAGAAATCCAAGGTCCGACCAGACTTGGAGGAGTTCAAGATTAGAAGAGCACAGATGTTCCCCTATGAGGAACTTGAAAGAGCAACTGGGGGATTCAAAGAAGAGTCCATAGTGGGGAAGGGAAGTTTTTCTTGTGTGTTCAAAGGGGTTCTCAAAGATGGGACAGTTGTTGCTGTTAAAAGGGCCATAATGTATCCCAACGTGCAGAAGAATTCCAAGGAGTTTCACACTGAGCTTGACTTGCTTTCTAGGTTGAACCATGCACACTTACTCAATCTACTAGGCTACTGTGAAGATGGTGGAGAGCGACTCCTGGTTTACGAGTACATGGCTCATGGCTCATTGCATCAACACCTTCATGGCAACAAAGTGATGAAAGAGCAAATGGATTGGGTGAGAAGGGTAACAATTGCAGTGCAAGCAGCTCGCGGAATCGAATATTTGCACGGCTATGCTTGTCCACCAGTGATTCATAGAGACATAAAGTCTTCAAACATTCTCATTGACGAAGAACACAATGCCAGAGTGGCTGATTTTGGTTTGTCACTGCTTGGTCCTGCAGATAGTAGCTCCCCACTGGCTGAACTACCAGCTGGAACTCTTGGCTATCTTGATCCTGAATACTATAGGCTTCATTACCTTACCACAAAGTCTGATGTATACAGCTTTGGTGTTCTACTTTTGGAGATATTGAGCGGAAGAAAAGCTATTGACATGCAATATGAAGAAGGGAACATTGTTCAATGGGCCGTGCCTCTGATCAAGTCAGGAGATATAGCTTCAATTTTGGATCCAGTTTTGAAACCTCCTCCTGATCTTGATGCATTGAGAAGAATAGCTAACGTGGCTTGTAAAAGTGTGCGAATGAGAGGGAAGGATAGGCCTTCAATGGACAAAGTGACAACAGTTCTGGAGAGAGCTCTTGCACAGTTGATGGGCAGTCCTTGCATTGAGCAGCCAATTTTGCCAACTGAGGTGGTTTTGGGAAGTAACAGGATGCACAAAAAATCATCTCAAAGGTCTTCAAACAGGTCAGCCTCAGAAAGCACTGATGTGGAGGATCAGAGGTTTGAGTTTAGAGCACCCTCATGGATCACTTTCCCCAGTGTAACTTCTTCTCAAAGAAGATCAGGCTCAGAGGCTGATGTTGAGGGAAAAAATGTAGAAGGGAGGAATTTGGGCAATGTTGGAGGTGGTGATGTTTTAAAAAGCCTTGAGGAAGAGATTGGTCTTGCCTCTCCTCGGGAGAAACTATTCTTGCAACACAACTTCTAA 2718 0.4467 MNLWPVRFGTLFEVVVFSCLWLQVSSLGSMSSIAVSYGDKGSAFCGLKSDGSHTVNCYGMNSAIIYGTPTHFPFFGLTAGDGFVCGLLMSSSQPYCWGSSSHVEMGVPQPMVKGAQYLEISAGDYHVCGLRKPLTGRHRNTSLVDCWGYNMTNNYVFDGQVQSISAGSQFNCGLFSQNRSVFCWGDETSSQVINMVPKGMRFQKISAGGYHVCGILEGVNSRAVCWGRSLLDLGEELSISLTRSGQGQGNVESVPNDPMLSVVGGKFHACGIKSYDRGVVCWGYTFKAGTRVPSGIKAFEIGAGNYFTCGVLVEKSHMPVCWGVGFPTSLPLPVSPRMCRSTPCPPDYYETSQNGLCKSPDFHVCMPCSDACPPEMYKRNGCNLKSDILCEYNCSLCSSPECLSNCSSSYSNAASGKRSERFWSLQLPVIIAEIAFAVFFVCIVSITAVLYVRYKLRDCQCSSSARGSKGKKLKGSSSHQKEKSKVRPDLEEFKIRRAQMFPYEELERATGGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMYPNVQKNSKEFHTELDLLSRLNHAHLLNLLGYCEDGGERLLVYEYMAHGSLHQHLHGNKVMKEQMDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWAVPLIKSGDIASILDPVLKPPPDLDALRRIANVACKSVRMRGKDRPSMDKVTTVLERALAQLMGSPCIEQPILPTEVVLGSNRMHKKSSQRSSNRSASESTDVEDQRFEFRAPSWITFPSVTSSQRRSGSEADVEGKNVEGRNLGNVGGGDVLKSLEEEIGLASPREKLFLQHNF* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00291 905 SUPERFAMILY RCC1/BLIP-II 250 334 IPR009091 -
Lapu5g00291 905 SUPERFAMILY Protein kinase-like (PK-like) 493 785 IPR011009 -
Lapu5g00291 905 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 14 905 - -
Lapu5g00291 905 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 343 390 IPR001368 GO:0005515
Lapu5g00291 905 MobiDBLite consensus disorder prediction 811 835 - -
Lapu5g00291 905 FunFam Serine/threonine-protein kinase-like protein CR4 26 193 - -
Lapu5g00291 905 MobiDBLite consensus disorder prediction 462 487 - -
Lapu5g00291 905 ProSiteProfiles Protein kinase domain profile. 513 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00291 905 SMART serkin_6 513 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00291 905 FunFam serine/threonine-protein kinase-like protein CCR1 483 590 - -
Lapu5g00291 905 Pfam Protein kinase domain 513 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00291 905 Gene3D Transferase(Phosphotransferase) domain 1 591 795 - -
Lapu5g00291 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Lapu5g00291 905 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Lapu5g00291 905 Gene3D Phosphorylase Kinase; domain 1 483 590 - -
Lapu5g00291 905 SUPERFAMILY RCC1/BLIP-II 26 229 IPR009091 -
Lapu5g00291 905 MobiDBLite consensus disorder prediction 812 827 - -
Lapu5g00291 905 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 92 133 IPR000408 -
Lapu5g00291 905 Gene3D - 76 342 IPR009091 -
Lapu5g00291 905 MobiDBLite consensus disorder prediction 851 880 - -
Lapu5g00291 905 FunFam Receptor protein kinase CRINKLY4 591 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00291 Lapu-Chr5 2375143 2379343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00291 11 905 Receptor kinase-like Gene Family AT3G59420 66.703 0.0 1211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lapu5g00291 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00291 - - gmx:100807392 1648.25