Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00283 ATGGATAAGGACAAATCTCTAGGTCACGGTGGAGGTTTGCCACCTCCCTCGGGACGTTATTCGGGTTACTCACCTGCCGGAACTGTGTTCAGTGTGAAATCTGAGCCACCGTCGTCGTCGACGTCGTCGTATCCGCCACTGGCTCCGGGAATTTCCACTCCGGAGTCTAGTGGATTTAGTCATGATATTAGCAGAATGCCCGATAATCCCCCGAGAAATAGAGGTCACAGGCGTGCTCATTCGGAGATTCTTACCCTACCGGATGATATTAGCTTTGACAGTGACCTTGGTGTGGTTGGAGGTGCCGATGGGCCTTCCTTCTCCGATGAGGCCGAGGAGGACTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCGTCGTCGGCGACGTCCACGTTTCAAATGGGTGAACCGTCTAGTGCAATGGGAGCGTCAGGTTCCACGACGGCATCAGGGGCACCCACCTCTTCTGCAGAGAATATTCCTGTTGGTACTCATGAACGGCCTAGAGTTAGACACCAGCATAGTCAATCCATGGATGGATCAACTACCATCAAGCCTGAGTTGCTGGTTTCTGGTTCTGAAGACTTGTCTGCGGCGGATTCCAAAAAAGCAATGTCAGCTGCTAAGCTTGCTGAGCTTGCCTTGATTGACCCTAAACGTGCGAAAAGGATATGGGCAAATAGACAGTCTGCTGCCAGGTCAAAAGAGAGGAAGATGAGGTACATTGCTGAGCTTGAAAGGAAGGTACAAACATTGCAAACGGAGGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGGGATACAAATGGCTTGAATTCTGAAAACAGTGAACTGAAGCTGCGATTACAAACCATGGAGCAACAAGTTCACTTGCAAGATGCACTAAATGACGCATTAAAAGAGGAAATTCAGCATTTGAAAATACTGACTGGACAAGCTATGCCATCCAATGGAGGAGGACCTATGCTGAACTTTGCCTCTTTCGGAGGGGGGCAGCAATTCTATCCCAATAATCATGCCATGCACACCCTTTTAGCTGCACAGCAGTTTCAACAACTCCAAATTCATCCTCAGAAGCAACATCAGTTTCAGCAGCTTCAACAACAACAAATGCTGCAACAGCAACAACAACAACAGCAACAACAACAGAGGGAACAACAGCATCAACAATCAAGCGACTTGAAAATGAGAGAAGCTTCACCTACTCCATGCCCCAAAGACAATGCGGTGTCAGATGTAAATCCTTCAGGGGCTAAGGACTGTTGA 1278 0.4789 MDKDKSLGHGGGLPPPSGRYSGYSPAGTVFSVKSEPPSSSTSSYPPLAPGISTPESSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDEAEEDLLSMYLDMDKFNSSSATSTFQMGEPSSAMGASGSTTASGAPTSSAENIPVGTHERPRVRHQHSQSMDGSTTIKPELLVSGSEDLSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPSNGGGPMLNFASFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQHQFQQLQQQQMLQQQQQQQQQQQREQQHQQSSDLKMREASPTPCPKDNAVSDVNPSGAKDC* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00283 425 Gene3D - 220 273 - -
Lapu5g00283 425 MobiDBLite consensus disorder prediction 1 86 - -
Lapu5g00283 425 FunFam probable transcription factor PosF21 220 273 - -
Lapu5g00283 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 219 282 IPR004827 GO:0003700|GO:0006355
Lapu5g00283 425 MobiDBLite consensus disorder prediction 67 84 - -
Lapu5g00283 425 SUPERFAMILY Leucine zipper domain 221 272 IPR046347 GO:0003700|GO:0006355
Lapu5g00283 425 MobiDBLite consensus disorder prediction 380 401 - -
Lapu5g00283 425 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 36 393 - -
Lapu5g00283 425 MobiDBLite consensus disorder prediction 130 182 - -
Lapu5g00283 425 Pfam bZIP transcription factor 221 279 IPR004827 GO:0003700|GO:0006355
Lapu5g00283 425 SMART brlzneu 217 281 IPR004827 GO:0003700|GO:0006355
Lapu5g00283 425 MobiDBLite consensus disorder prediction 380 425 - -
Lapu5g00283 425 MobiDBLite consensus disorder prediction 27 63 - -
Lapu5g00283 425 MobiDBLite consensus disorder prediction 130 163 - -
Lapu5g00283 425 Coils Coil 237 306 - -
Lapu5g00283 425 CDD bZIP_plant_RF2 222 271 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00283 Lapu-Chr5 2329425 2333042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00283 19 351 bZIP Transcription Factor Family AT1G06070 73.653 2.82e-172 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu5g00283 bZIP_1 4.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00283 - - gmx:100786738 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00283 5 2329425 2333042 Lapu5g00283 5 2329425 2333042 ECH