Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00262 ATGGCGTACCAGACTCCCGATCAAGATTCAGGATCCGATCCCAAGACTCCAACGCGTCTGTATAACCCCTACAAGGACCTTGAAGTCCCCATTCGCAACCTCTACCAACTCCCAACCTCCCCCGAGTATCTCTTCGTCGAGGAGGCTCGCCGAAAGCGTCGATCCTGGGGTGAGAACCTCACCTTCTACACCGGATGCGGCTACCTCGCCGGCGCCGTCGGCGGTGCCGCCTCCGGCCTCGTTGAAGGCGTCAAGTCCTTTGAGTCCGGTGACACCGCCAAGCTCCGCGTCAACCGCATACTAAACACCTCCGGTCATTCCGGGCGCGCCTGGGGCAACCGCCTCGGCGTCATAGGCCTGCTCTACGCCGGCATCGAGAGCGGGATCGTGGCTGCAAGGGACACTGATGACGTCTGGAACAGCGTCGCGGCAGGACTCGGCACTGGCGCGCTGTATCGCGCAGCGAGAGGGGTGCGGTCGGCGGCGGTGGCGGGCGCCGTTGGCGGCGTTGTTGTTGGAGTCGCTGTCACCGCGAAGCAGGCGTTGAAGCGTTACGTGCCTATATGA 567 0.6332 MAYQTPDQDSGSDPKTPTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGAASGLVEGVKSFESGDTAKLRVNRILNTSGHSGRAWGNRLGVIGLLYAGIESGIVAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00262 188 MobiDBLite consensus disorder prediction 1 21 - -
Lapu5g00262 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
Lapu5g00262 188 PANTHER TIM23 33 177 IPR045238 GO:0022857
Lapu5g00262 188 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00262 Lapu-Chr5 2152287 2154310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00262 9 188 Chloroplast and Mitochondria Gene Families AT1G72750 70.492 3.47e-81 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00262 K17794 - gmx:100813158 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00262 5 2152287 2154310 Lapu10g00431 10 6712746 6714017 PCT