Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu5g00253 | ATGGACCACCACAAAGAGAGAATTAAGAGTGGGTGCCAGAAGATTTTGGAAGGGATAAATTCAATGCCTTTGGTAAACTTAGATGACCAGCAAGTGCATTCTTTGGTGATGATGAGAGAAATAGCGCGTGGAGTTGTTGATGATCGAGATAGGAAGGTGACTAAGAGTGATGTCATCACTGCCTTGCGCTACAGCATTGAGAAAATGGTCTGTGCATCCAGGGATATTATTCAGATTTTAAGTAGGATGTCCTTTGAAGGTTTGGATGACGAAAGGATGCATTTAGTCACGAGGATGAAAGAAATTGCACATGGGGTTATCGATAAACAACCTCGAGTTGCAATACCTAGGCCTAGTTTGCTTGCCGAACAAGTTGGCTTTGTGGATGAAGGAATGCAAGATAGTCTCGTGGTTGAGTCAACCAAGATTTGCAATGGGAATGCCCTAATTGATGGGGCACGGAGCATGACTAATGAAGATGAGATGTTGGATGTAGAACATGTTTTAAGGTTTGAGAATGGAATAGATGAAATACAGGAGTCTTTGTTACCGTGCTTTCAGCAATTTCTTATGTGGCCCCCTGATGATTGCGTCACTATAGAGTGGGTTCAGGATGTGATGGTCGTCCTTGAGCAGGCTTCACAGAAGATGTTGTCATCTGAATACTGTCATGTTGTGCCGACCCTTTTGGTGGAGAAATTGGCTGATGCTGCTTGCAGGATTTTATGTAAAGAACCAAACTGTGTGGAGATCAATTGCCAAGGAGAAGATTCAAGAGTAATTGTAGTGGGTGATATACACGGGCAGTTTCATGATTTAATGTTTCTTTTCAAGCATGCAGGAGTTCCCTCTGAGAACCAGATTTACGTTTTTAATGGAAATTATGTAGATAAAGGAGCTTGGGGAATTGAAGTATTTTTGGTCTTACTAGCTTGGAAGGTATTGATGCCTCATAGAGTATTTCTACTTCGTGGAAATCATGAATCAAGATACTGCACTGCAAGATATGGTTTTAAGAAGGAGGTTTGCGCCAAATATGGTGATCAAGGTGATGATGTCTACAATAAATTCCTAGAGTGTTTCAAGGAGCTTCCATTAGCTTCAGTTATTGCCAACTGTGTTTATACTACTCATGGAGGACTTTTCCGTAGTATGCATGCAGACCCTTCACAAAAGCCGAAACGGAATAAAACACAGAGTGTGGATCTTGGCTCTTTAGCCGAGTTATCTGAAGTTAAAAGATCTTGTGTAGATTGTCCTTATGAAGGTCCTAACATATTATTGAGTGATGTTCTCTGGTCAAGACCATCTAACAGGTACGGGCTGAGGGATAATACAGGTAAAAAGTTAGGTTTATGGTGGGGTCCTGATTGCACTGAGGCATTTCTAAAGCAGCACAATCTAAAGCTGATTATCAGATCACATGAAGGACCCGATCCAAGGGCTGGTAGAGACAATGATCTTGGGGATATGCCGAGTGGATACAGCATAGATCATGATGGAGAATCAGGAAAACTTTGTACACTTTTTAGTGCTCCAGACTATCCACAGTTTGGTAAAAGGAGATGTAACAATAAGGTGGCATATGCTGTATTGAAGTCACCTGATTTTGCCAGTCCTTCCTTTCACTCATTCAAAGGGACAGAAAGACCAATGGTGGATCCTTATGTTGATTTTGGTGCTGATGACATGGACTCGAGTAAACTAGACTCTTCTCAAAGTGCCTCAACCTCTACCCTCTCTGCTTCTGAAAGATTGTATCCAGAAGGGATGAGACCCGAGTTTGACTTTGGGGCATTAGGTATATACAATGCCCCATGTTGGAGTGTTGAGCTTCCTGATGGTTCAGGTGGTACTCAAGTTGTGGAGGTTCCAAGGGCGTCATTGGTGGAAGGGTTGCCTCTGCCTCCAAACATACAGGAGCCACACAAAGCTGCTTATGAGTATTTGTTTGAGCTAGTTGCTGGCCTGAAACATATGATTGTAACAAGGGAGACTGAGAACAGGGCCCGTGTGTCTGCTTTGAGAAGTAGAGCTAGGAAACGAAAGGGTCATGGATAA | 2061 | 0.426 | MDHHKERIKSGCQKILEGINSMPLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKSDVITALRYSIEKMVCASRDIIQILSRMSFEGLDDERMHLVTRMKEIAHGVIDKQPRVAIPRPSLLAEQVGFVDEGMQDSLVVESTKICNGNALIDGARSMTNEDEMLDVEHVLRFENGIDEIQESLLPCFQQFLMWPPDDCVTIEWVQDVMVVLEQASQKMLSSEYCHVVPTLLVEKLADAACRILCKEPNCVEINCQGEDSRVIVVGDIHGQFHDLMFLFKHAGVPSENQIYVFNGNYVDKGAWGIEVFLVLLAWKVLMPHRVFLLRGNHESRYCTARYGFKKEVCAKYGDQGDDVYNKFLECFKELPLASVIANCVYTTHGGLFRSMHADPSQKPKRNKTQSVDLGSLAELSEVKRSCVDCPYEGPNILLSDVLWSRPSNRYGLRDNTGKKLGLWWGPDCTEAFLKQHNLKLIIRSHEGPDPRAGRDNDLGDMPSGYSIDHDGESGKLCTLFSAPDYPQFGKRRCNNKVAYAVLKSPDFASPSFHSFKGTERPMVDPYVDFGADDMDSSKLDSSQSASTSTLSASERLYPEGMRPEFDFGALGIYNAPCWSVELPDGSGGTQVVEVPRASLVEGLPLPPNIQEPHKAAYEYLFELVAGLKHMIVTRETENRARVSALRSRARKRKGHG* | 687 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu5g00253 | 686 | Pfam | Calcineurin-like phosphoesterase | 259 | 478 | IPR004843 | GO:0016787 | |
Lapu5g00253 | 686 | SUPERFAMILY | Metallo-dependent phosphatases | 222 | 555 | IPR029052 | - | |
Lapu5g00253 | 686 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 323 | 328 | IPR006186 | GO:0016787 | |
Lapu5g00253 | 686 | Gene3D | - | 201 | 584 | IPR029052 | - | |
Lapu5g00253 | 686 | SMART | pp2a_7 | 226 | 549 | IPR006186 | GO:0016787 | |
Lapu5g00253 | 686 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 34 | 670 | - | - | |
Lapu5g00253 | 686 | PRINTS | Serine/threonine phosphatase family signature | 322 | 346 | IPR006186 | GO:0016787 | |
Lapu5g00253 | 686 | PRINTS | Serine/threonine phosphatase family signature | 359 | 385 | IPR006186 | GO:0016787 | |
Lapu5g00253 | 686 | PRINTS | Serine/threonine phosphatase family signature | 505 | 521 | IPR006186 | GO:0016787 | |
Lapu5g00253 | 686 | PRINTS | Serine/threonine phosphatase family signature | 289 | 316 | IPR006186 | GO:0016787 | |
Lapu5g00253 | 686 | PRINTS | Serine/threonine phosphatase family signature | 259 | 286 | IPR006186 | GO:0016787 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu5g00253 | Lapu-Chr5 | 2070927 | 2078139 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu5g00253 | 190 | 470 | Calmodulin-binding Proteins | AT5G63870 | 51.034 | 2.29e-95 | 295 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu5g00253 | K04460 | - | gmx:100779241 | 983.786 |