Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00253 ATGGACCACCACAAAGAGAGAATTAAGAGTGGGTGCCAGAAGATTTTGGAAGGGATAAATTCAATGCCTTTGGTAAACTTAGATGACCAGCAAGTGCATTCTTTGGTGATGATGAGAGAAATAGCGCGTGGAGTTGTTGATGATCGAGATAGGAAGGTGACTAAGAGTGATGTCATCACTGCCTTGCGCTACAGCATTGAGAAAATGGTCTGTGCATCCAGGGATATTATTCAGATTTTAAGTAGGATGTCCTTTGAAGGTTTGGATGACGAAAGGATGCATTTAGTCACGAGGATGAAAGAAATTGCACATGGGGTTATCGATAAACAACCTCGAGTTGCAATACCTAGGCCTAGTTTGCTTGCCGAACAAGTTGGCTTTGTGGATGAAGGAATGCAAGATAGTCTCGTGGTTGAGTCAACCAAGATTTGCAATGGGAATGCCCTAATTGATGGGGCACGGAGCATGACTAATGAAGATGAGATGTTGGATGTAGAACATGTTTTAAGGTTTGAGAATGGAATAGATGAAATACAGGAGTCTTTGTTACCGTGCTTTCAGCAATTTCTTATGTGGCCCCCTGATGATTGCGTCACTATAGAGTGGGTTCAGGATGTGATGGTCGTCCTTGAGCAGGCTTCACAGAAGATGTTGTCATCTGAATACTGTCATGTTGTGCCGACCCTTTTGGTGGAGAAATTGGCTGATGCTGCTTGCAGGATTTTATGTAAAGAACCAAACTGTGTGGAGATCAATTGCCAAGGAGAAGATTCAAGAGTAATTGTAGTGGGTGATATACACGGGCAGTTTCATGATTTAATGTTTCTTTTCAAGCATGCAGGAGTTCCCTCTGAGAACCAGATTTACGTTTTTAATGGAAATTATGTAGATAAAGGAGCTTGGGGAATTGAAGTATTTTTGGTCTTACTAGCTTGGAAGGTATTGATGCCTCATAGAGTATTTCTACTTCGTGGAAATCATGAATCAAGATACTGCACTGCAAGATATGGTTTTAAGAAGGAGGTTTGCGCCAAATATGGTGATCAAGGTGATGATGTCTACAATAAATTCCTAGAGTGTTTCAAGGAGCTTCCATTAGCTTCAGTTATTGCCAACTGTGTTTATACTACTCATGGAGGACTTTTCCGTAGTATGCATGCAGACCCTTCACAAAAGCCGAAACGGAATAAAACACAGAGTGTGGATCTTGGCTCTTTAGCCGAGTTATCTGAAGTTAAAAGATCTTGTGTAGATTGTCCTTATGAAGGTCCTAACATATTATTGAGTGATGTTCTCTGGTCAAGACCATCTAACAGGTACGGGCTGAGGGATAATACAGGTAAAAAGTTAGGTTTATGGTGGGGTCCTGATTGCACTGAGGCATTTCTAAAGCAGCACAATCTAAAGCTGATTATCAGATCACATGAAGGACCCGATCCAAGGGCTGGTAGAGACAATGATCTTGGGGATATGCCGAGTGGATACAGCATAGATCATGATGGAGAATCAGGAAAACTTTGTACACTTTTTAGTGCTCCAGACTATCCACAGTTTGGTAAAAGGAGATGTAACAATAAGGTGGCATATGCTGTATTGAAGTCACCTGATTTTGCCAGTCCTTCCTTTCACTCATTCAAAGGGACAGAAAGACCAATGGTGGATCCTTATGTTGATTTTGGTGCTGATGACATGGACTCGAGTAAACTAGACTCTTCTCAAAGTGCCTCAACCTCTACCCTCTCTGCTTCTGAAAGATTGTATCCAGAAGGGATGAGACCCGAGTTTGACTTTGGGGCATTAGGTATATACAATGCCCCATGTTGGAGTGTTGAGCTTCCTGATGGTTCAGGTGGTACTCAAGTTGTGGAGGTTCCAAGGGCGTCATTGGTGGAAGGGTTGCCTCTGCCTCCAAACATACAGGAGCCACACAAAGCTGCTTATGAGTATTTGTTTGAGCTAGTTGCTGGCCTGAAACATATGATTGTAACAAGGGAGACTGAGAACAGGGCCCGTGTGTCTGCTTTGAGAAGTAGAGCTAGGAAACGAAAGGGTCATGGATAA 2061 0.426 MDHHKERIKSGCQKILEGINSMPLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKSDVITALRYSIEKMVCASRDIIQILSRMSFEGLDDERMHLVTRMKEIAHGVIDKQPRVAIPRPSLLAEQVGFVDEGMQDSLVVESTKICNGNALIDGARSMTNEDEMLDVEHVLRFENGIDEIQESLLPCFQQFLMWPPDDCVTIEWVQDVMVVLEQASQKMLSSEYCHVVPTLLVEKLADAACRILCKEPNCVEINCQGEDSRVIVVGDIHGQFHDLMFLFKHAGVPSENQIYVFNGNYVDKGAWGIEVFLVLLAWKVLMPHRVFLLRGNHESRYCTARYGFKKEVCAKYGDQGDDVYNKFLECFKELPLASVIANCVYTTHGGLFRSMHADPSQKPKRNKTQSVDLGSLAELSEVKRSCVDCPYEGPNILLSDVLWSRPSNRYGLRDNTGKKLGLWWGPDCTEAFLKQHNLKLIIRSHEGPDPRAGRDNDLGDMPSGYSIDHDGESGKLCTLFSAPDYPQFGKRRCNNKVAYAVLKSPDFASPSFHSFKGTERPMVDPYVDFGADDMDSSKLDSSQSASTSTLSASERLYPEGMRPEFDFGALGIYNAPCWSVELPDGSGGTQVVEVPRASLVEGLPLPPNIQEPHKAAYEYLFELVAGLKHMIVTRETENRARVSALRSRARKRKGHG* 687
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00253 686 Pfam Calcineurin-like phosphoesterase 259 478 IPR004843 GO:0016787
Lapu5g00253 686 SUPERFAMILY Metallo-dependent phosphatases 222 555 IPR029052 -
Lapu5g00253 686 ProSitePatterns Serine/threonine specific protein phosphatases signature. 323 328 IPR006186 GO:0016787
Lapu5g00253 686 Gene3D - 201 584 IPR029052 -
Lapu5g00253 686 SMART pp2a_7 226 549 IPR006186 GO:0016787
Lapu5g00253 686 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 670 - -
Lapu5g00253 686 PRINTS Serine/threonine phosphatase family signature 322 346 IPR006186 GO:0016787
Lapu5g00253 686 PRINTS Serine/threonine phosphatase family signature 359 385 IPR006186 GO:0016787
Lapu5g00253 686 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Lapu5g00253 686 PRINTS Serine/threonine phosphatase family signature 289 316 IPR006186 GO:0016787
Lapu5g00253 686 PRINTS Serine/threonine phosphatase family signature 259 286 IPR006186 GO:0016787
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu5g00253 Lapu-Chr5 2070927 2078139 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00253 190 470 Calmodulin-binding Proteins AT5G63870 51.034 2.29e-95 295
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00253 K04460 - gmx:100779241 983.786