Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00236 ATGGGATTGCTGCTTATTTTCCTGCTAATTAAGCTACATTTCGTTACATGTACACCCCAGCTTCATGAATATGCTGTCTCCTATTTGCACTATTCGAGAATCCGAAGCCCTTCTAGCATTGCATTCCCACCAACAGTATCATTTCATAGAGTTCCTGCTACTACTGCTCTTCCACCTTCCAAGGCATCTTCTAGAATTCCCAGAAGTATTGCACTTTCACCTTCCCAGTCATTTTCCAAAAGAAAATGGACGCAGACTTCTGTGGACTCTCCAATACTACACCATAAGCATCACCACTCCAGAAGAAAGTTCAGCAAAGTTCCTGGACCAACCTTTTCAATCAGCCCTCATACTCATCAAGGTCCTCCTCCAGTCTTCAAATCACGACATTCATTCTCTTCACCTATGAGCTGGGATTTACATGTACCCGCACAGGCTCCTGCACCAGCACCAATAGTTCTATCACACCACTTGAATGTGCCCTCTACTTCACCTAGAGTTTCACCTCAAGGTTCATCAGTGAAAAAGACAAGGACTCCACCAGCATATGCTTTGGTTCTACCATCTCCACCGCCTAACAAAGATTGTATGTCGGTGACATGCTCTGAGCCCTTGACATATACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTTCGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGGTTTCCAAGCTGGCCAAAGAAATTGCAGCTAGTGTTTTGCTGAACCGTAATCAAGTACGCATTGTGGGAGCCGATGCAACTACTCAGCAGCTCGAGAAAACCACTGTTCTCATAAACTTGGTACCCCAAGGAGTGAAATTTGATGATACAACAGCTTTTTTAATATATAAGAAATTCTGGCAGAGAGAGATTCTCAATGATGCTTCTGACTTTGGTGCCTATGAAGTGCTCTATATTCATTATCCAGGCCTTCCACCATCTCCACCTGCAAATGTTCACGGTATAGACGTTGAACCATATCCTGGTCACAACAACAACGGAACAATGATGAAACCTTTGGGAGTAGATGTCTCAAGGAAGCAAAAAGAAGGGAGTGGTGGAAGAGTGGTTATTATGATCATTCTGTCATCTTTTACCGCCTTCGTTCTATTCGTTGGATTTTCATGGCTTTTTCTCTTGAAATGTGGTTCCTGTACTCCTGAACCTGAACATATTCCAGATGCCAAAATTCCATCCTGTTCAAAGCGATCAGGTACTGCCAGTGCTAGGTCATTGATTTATGCGAGCATGCCAGGTTCTAGATCAATGTCCTTCAGTTCTGGAACAATAACCTATGCAGGATCAGCTAAAATATTTACTTTGAACGAAATCGAGAAAGCAACAAATAACTTCAATTTTTCAAGCATACTAGGAGAAGGTGGCTTCGGTCTTGTTTATAAAGGTTACCTACATGATGGCAGATATGTGGCTGTGAAGATTCTCAAAAGAGATGATCAGCATGGTGACCACGAATTCTTTGCAGAAACAGAGATGCTTAGCCGCTTGCACCACAGAAATTTAGTTAAATTGATAGGCATATGCACAGAGAAACAGACTCGCTGCTTAGTCTATGAGCTTGTCCCTAATGGCAGTGTGGAATCCCACTTACATGGTGTTGACAAGGAAACCGAACCACTTGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTAGAGGATTAGCTTATCTGCATGAAGATTGTAATCCATGTGTCATACATAGAGACTTCAAATCCAGCAACATCTTGTTGGAATATGATTTCACACCCAGAGTTTCAGATTTTGGCTTGGCTAGAACAACATTGAACGAGGGAAACAAGCCCATCTCAACACATGTTATTGGAACATTTGGATACGTAGCTCCTGAATATGCAATGACTGGACACCTTCTTGTCAAAAGTGATGTTTACAGCTATGGAGTTGTACTTCTTGAGCTTCTAACTGGAAGAAAGCCTGTGGATTTGTCACAGCCACCAGGTCAAGAAAATCTTGTTGCTTGGGCTCGGCCACTTCTTACAAGTAAGGAGGGTTTGCAGAAGATCATAGACCCAGTTATGAAGCCCAATGTTTCTGTTGACACCATTGTAAGAGTTGCAGCTATTGCATCCTTGTGCGTGCAACCAGAAGTCACTCAACGTCCTTTTATGAGTGAAGTTGTTCAGGCCTTGACGCTGGTATGCAGTGAGTTTGAGGAAACAAGAGTTCTGTAA 2241 0.4284 MGLLLIFLLIKLHFVTCTPQLHEYAVSYLHYSRIRSPSSIAFPPTVSFHRVPATTALPPSKASSRIPRSIALSPSQSFSKRKWTQTSVDSPILHHKHHHSRRKFSKVPGPTFSISPHTHQGPPPVFKSRHSFSSPMSWDLHVPAQAPAPAPIVLSHHLNVPSTSPRVSPQGSSVKKTRTPPAYALVLPSPPPNKDCMSVTCSEPLTYTPPGSPCGCVWPLQVKLRISIAIYKFFPLVSKLAKEIAASVLLNRNQVRIVGADATTQQLEKTTVLINLVPQGVKFDDTTAFLIYKKFWQREILNDASDFGAYEVLYIHYPGLPPSPPANVHGIDVEPYPGHNNNGTMMKPLGVDVSRKQKEGSGGRVVIMIILSSFTAFVLFVGFSWLFLLKCGSCTPEPEHIPDAKIPSCSKRSGTASARSLIYASMPGSRSMSFSSGTITYAGSAKIFTLNEIEKATNNFNFSSILGEGGFGLVYKGYLHDGRYVAVKILKRDDQHGDHEFFAETEMLSRLHHRNLVKLIGICTEKQTRCLVYELVPNGSVESHLHGVDKETEPLDWNARMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEYDFTPRVSDFGLARTTLNEGNKPISTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTSKEGLQKIIDPVMKPNVSVDTIVRVAAIASLCVQPEVTQRPFMSEVVQALTLVCSEFEETRVL* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00236 746 SUPERFAMILY Protein kinase-like (PK-like) 439 734 IPR011009 -
Lapu5g00236 746 FunFam receptor-like serine/threonine-protein kinase ALE2 433 535 - -
Lapu5g00236 746 ProSiteProfiles Protein kinase domain profile. 460 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00236 746 MobiDBLite consensus disorder prediction 89 130 - -
Lapu5g00236 746 CDD STKc_IRAK 466 734 - -
Lapu5g00236 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Lapu5g00236 746 Pfam Protein tyrosine and serine/threonine kinase 462 733 IPR001245 GO:0004672|GO:0006468
Lapu5g00236 746 Gene3D Phosphorylase Kinase; domain 1 433 535 - -
Lapu5g00236 746 Gene3D Transferase(Phosphotransferase) domain 1 536 744 - -
Lapu5g00236 746 FunFam Receptor-like serine/threonine-protein kinase ALE2 536 745 - -
Lapu5g00236 746 ProSitePatterns Protein kinases ATP-binding region signature. 466 488 IPR017441 GO:0005524
Lapu5g00236 746 PANTHER OS01G0750732 PROTEIN 188 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00236 Lapu-Chr5 1945302 1950718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00236 96 746 Receptor kinase-like Gene Family AT5G56890 55.425 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lapu5g00236 PK_Tyr_Ser-Thr 5.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00236 - - gmx:100775318 1231.08