Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00211 ATGTCAATAGAATCTGATCTCAAAAAAGAGTATCAACGACAGATGTGGACTGTGAGAAGCTTCCCAGAAGGAAAAAGGAACTGCTACAAAATAAACATCGTAAGAGGCTCTAAGTATCTGATCAAGACTGCTTTTTTGTACGGAAATTATGATGGGCTGACTGAGATGCCAAAGTTTGATATTCATCTCGGGGCTAACCGGTGGGGTACAGTGAACATAAACAATGGATCGATTGACCTGGCCAAGGAGATCATATATGTACCTTCACTGGATTATGTACAGATCTGTCTGGTTGACACAGGCCTTGGAACACCATTTATATCGGCCATAGAATTGAGAACTTTGCCAAATGATATTTATGTCACTGAATCTGGATCATTGGAAACTTACTTCCGGTGGGATTTAGGTTCAAACATGGGCTACAGGTACAAGGACGATGTTTATGATCGTTACTGGAGCTATGGCCACCTCAATAATTGGAGACAATTAAATGTTTCGGTTTCTGCTGATGCTTTAGATCAGAACGTATACAAAGCGCCAGCTATTGTGATGAGCACTGCAGTTACACCAGTAAATGTTAGTGCTCCATTGGTAATAAACTGGGAGCCAGATGATCCAACTGAGCAATTCTATGTTTACTTGTACTTCATGGAGATTCAAGAATTAGCGACGAATCAGACAAGAGAATTCAACATCGTGGAAAACGGTAAACAGAGGTATTCAAAGTTTTCGCCAAGGAATCTGCTTGTCACCACTTTATATAGCTCATCAGCCTCCAGTGGGAAAGAAATTATATATTCTCTTGAAATGACCAAAAACTCAACCCTGCCTCCCATCATCAATGCCCTTGAAATTTACAGAGTAATAGATTTCCCGCAATCAGATACATTCAAAGGAGATGATGACGCCATTACAACCATCAAATCAATCTATGGGGTGACAAGAGATTGGCAAGGTGATCCATGTGCCCCTGTAGATTACTTGTGGCATGGTTTGAATTGTAGTTATAGCAAAAAAGAGTCTCCAAGAATCACAACTTTGGATTTGTCTTCAAGTGGGTTGTCAGGAAAGATAGACCCTTCAATTTCAAACCTCAGCATGTTGGAAAAGTTGGATTTATCAAACAATAGCTTAAATGGTGAAATTCCTGATTTTCTGTCTCAATTAAAACACTTAAAGATATTAAACTTGGAGAAGAATAACCTCTCTGGTTTAATTCCCTCAGCACTTGCTGAAAAATCTAAGGAAGGTTCTCTGTCACTGAGTGTGGACCAAAATCCATATATATGTGAATCTGGTCAATGCAACGAGCAGGACAAGGAGAGGGAAAAGGAAAAGAAAACGAACGTTGTTGCACCAATAGTAGCATCAGTTTGTGGGGTTGTGATCCTTCTCGTTGTCGTGGCAGCTATATTATGGACGCTTAAAAGGAGAAAATTGAAAGCTTTGATAGTAGAAAAGGATCAAGCTCAGATCTCACCACAACACACAGAACAAGATGATTTGTTGCTACCATTCAGAAAACAAATTTATTCGTACTCCGATATCCTTAAAATCACCAACAATTTCAATACAACTCTCGGTAAAGGAGGATTTGGAACTGTTTATCTGGGCCATATCAATGACACTCCAGTTGCAGTGAAAATGCTTTCCTCATCGTCTGTGCAGGGTTTTCAACAATTTCAAGCAGAGGCAAGTTTCTCTATCACTGTTAAACTTCTAATGAGAGTTCATCACAAAAATTTAACCTCCCTGGTTGGTTATTGTAATGAAGAAGCCCATAAGGGTCTCATATATGAGTACATGGCTAATGGAAACTTACAAGAACATCTCTCTGGTGAACACAGCAAAACAAAATTCTTCACCTGGGAAGAAAGACTTCGTATAGCAGTGGATGCAGCCTTAGGCCTGGAGTATCTGCAAAATGGTTGCAAGCCGCCTATAATCCACAGAGACATAAAATCTACAAACATCTTGTTGAATGAACACTTCCAAGCAAAGTTATCTGATTTTGGTCTATCCAAAATTATCCCAACAGAAGGGGGAACTCACGTGTCAACTGTTGTTGCTGGTACTCCTGGTTATCTGGATCCTGAGTACTTCATAACAAATAGATTGACAGAGAAGAGTGACGTTTTTAGTTTTGGTGTTGTTCTTTTGGAGATAATCACAAATCAACCAGTGATAATGAGGGGTGAAGAAAGCATTCACATAAGTGAATGGGTTAGCTCGTTGGTTGTGAAAGGGGATATCAAGGCCATTGTTAACTCAAGGCTAGAAGGAGATTATGATACCAATTCAGTTTGGAAAGCAGTAGAAATAGCAACAGCATGTGTGTCTCCAAATATCAACAGAAGGCCTATCACAAGCGTGATAGTGATTGAACTGAAGGAGTCTTTATCAATGGAAGTAGCTCGAACTAAATATAGAGGTAACCATTCAACAGACTCAGGGGTGATCATGAATCTGAATGCCGAATTTATTCCCCAGGCCAGTTTACACAGTTTAGAAATGAAAGGATACTTTCTGCTAATTTTGACTTTTCAACTCTCTTTAATTCTTCCTATCATTGTTCATGGGGATCAATCAGGATTCATCAGTATTGACTGCGGACTTGTGGATGAACCAAGCTATACAGATGAAACTACTGCCATCTATTACTCTTCGGATGTCAACTTCATAGACAGTGGTGTAAGCCACAGCATTTCTCTTAAATATAAGGCTTCCCTTGACAGGCAGTTCTGGAATGTCAGAAGCTTCCCAGTTGGAACCAGGCACTGCTATACCCTCGTTTCTCAAGGAAGTGCCAAGAAATATTTAGTGAGAGCAAGGTTTGCATATGGAAGCTACGATGGAAAAGACTCTCTTCCCGAATTTGACATCTATGTTGGAGCCAATTGGTGGGGATCAGTGGTGTTTGAGGATGCATCCAGTGTGGTCACCAGGGAAATCATTTATGCTGCTTCATCAGATTATGTTCATGTTTGTTTATTCAACACTGGCAAGGGTACACCTTTTATTTCAGTTTTAGAGCTTAGAGTTCTTAACAGTGATGCCTATCTAGTCAACTGTGTGGAGCTCTTGGCACGGTTTGATGTAGGCTTACGGGATGGTAAAATAGTCAGATTTCCAGATGATGTCTATGATAGAATATGGACACCTTATAGCTCAAATGACTGGAAACAGATAGATACCATGCTTACCATAGACCATGATGCTACTTCATATAATTTTTTACCATTGCCTCCCTCCATTGTCATGGGAACCGCGGCAATTCCATCAAATGTCAAGGACAATATAGAGTTCCACTTCCTTCCCAAGTATAATTCTTCCACGCTTTATGTGTACATGTTCTTTGCTGAAATCCAGAAGCTTCAGGCAAACCAAGTTAGAGAGTTCAACATTTTTGTAAACGGGGAGATTTTAAATAATGATCCAATCAATCCTTTATACCTGAAGAGTGTGTATCAAGTAGCTCTAAGTGAAAATCAGTTGGAACTCTGGATTAATAAAACTAGTAGATCAACTCTTCCACCTGTTCTCAACGCCATTGAGATATATAAGGCAAAAAAATTCTCACAATCAGAAACATATCAAAGAGATGTTGATGGTATCATAAATGTCAAGTCAGTGTATGGAATCAAGAGAAACTGGCAAGGAGATCCTTGTACTCCACTTGATTACTTGTGGGACGGTCTTAACTGCAGCTATGCTGAATCTGGTTTAGCCAGGATTGTATACTTGAACTTATCTTCCCGTGGTTTAATTGGAACTATAGCTTCTGGCATATCCAATCTGCAGTACATAGAATATTTGGATTTATCAAACAACAATTTGACCGGGGTCGTGCCTCAATTCCTACATCAACTACGCTTCTTAAGAGTTCTAAACCTAGAAGACAATCAGCTATCAGGAACAATTCCAACGCAACTCATTGTACTTTCCCAGAAAGGTTCACTTGAATCCAATTTTGGTGGAAATCCAAATCTTTGCTCCCCAGGTTCATGCAATAGTAAGAATAGGAACAGGCTTGTAGTTCCACTGGTAGCATCGCTCTGTGGAGCTTTCGTGATACTAGTAATAACGGTGATTTCTTTCTGCATACACAAAAGGAGACAATTTCAACTCACCAGAGCAAGCAGATTGCTTATTCCAGAATAA 4161 0.3973 MSIESDLKKEYQRQMWTVRSFPEGKRNCYKINIVRGSKYLIKTAFLYGNYDGLTEMPKFDIHLGANRWGTVNINNGSIDLAKEIIYVPSLDYVQICLVDTGLGTPFISAIELRTLPNDIYVTESGSLETYFRWDLGSNMGYRYKDDVYDRYWSYGHLNNWRQLNVSVSADALDQNVYKAPAIVMSTAVTPVNVSAPLVINWEPDDPTEQFYVYLYFMEIQELATNQTREFNIVENGKQRYSKFSPRNLLVTTLYSSSASSGKEIIYSLEMTKNSTLPPIINALEIYRVIDFPQSDTFKGDDDAITTIKSIYGVTRDWQGDPCAPVDYLWHGLNCSYSKKESPRITTLDLSSSGLSGKIDPSISNLSMLEKLDLSNNSLNGEIPDFLSQLKHLKILNLEKNNLSGLIPSALAEKSKEGSLSLSVDQNPYICESGQCNEQDKEREKEKKTNVVAPIVASVCGVVILLVVVAAILWTLKRRKLKALIVEKDQAQISPQHTEQDDLLLPFRKQIYSYSDILKITNNFNTTLGKGGFGTVYLGHINDTPVAVKMLSSSSVQGFQQFQAEASFSITVKLLMRVHHKNLTSLVGYCNEEAHKGLIYEYMANGNLQEHLSGEHSKTKFFTWEERLRIAVDAALGLEYLQNGCKPPIIHRDIKSTNILLNEHFQAKLSDFGLSKIIPTEGGTHVSTVVAGTPGYLDPEYFITNRLTEKSDVFSFGVVLLEIITNQPVIMRGEESIHISEWVSSLVVKGDIKAIVNSRLEGDYDTNSVWKAVEIATACVSPNINRRPITSVIVIELKESLSMEVARTKYRGNHSTDSGVIMNLNAEFIPQASLHSLEMKGYFLLILTFQLSLILPIIVHGDQSGFISIDCGLVDEPSYTDETTAIYYSSDVNFIDSGVSHSISLKYKASLDRQFWNVRSFPVGTRHCYTLVSQGSAKKYLVRARFAYGSYDGKDSLPEFDIYVGANWWGSVVFEDASSVVTREIIYAASSDYVHVCLFNTGKGTPFISVLELRVLNSDAYLVNCVELLARFDVGLRDGKIVRFPDDVYDRIWTPYSSNDWKQIDTMLTIDHDATSYNFLPLPPSIVMGTAAIPSNVKDNIEFHFLPKYNSSTLYVYMFFAEIQKLQANQVREFNIFVNGEILNNDPINPLYLKSVYQVALSENQLELWINKTSRSTLPPVLNAIEIYKAKKFSQSETYQRDVDGIINVKSVYGIKRNWQGDPCTPLDYLWDGLNCSYAESGLARIVYLNLSSRGLIGTIASGISNLQYIEYLDLSNNNLTGVVPQFLHQLRFLRVLNLEDNQLSGTIPTQLIVLSQKGSLESNFGGNPNLCSPGSCNSKNRNRLVVPLVASLCGAFVILVITVISFCIHKRRQFQLTRASRLLIPE* 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00211 1386 FunFam Leucine-rich repeat receptor-like kinase 1200 1333 - -
Lapu5g00211 1386 SUPERFAMILY Protein kinase-like (PK-like) 501 790 IPR011009 -
Lapu5g00211 1386 Gene3D Phosphorylase Kinase; domain 1 508 601 - -
Lapu5g00211 1386 Gene3D Transferase(Phosphotransferase) domain 1 602 817 - -
Lapu5g00211 1386 FunFam Leucine-rich repeat receptor-like kinase 302 432 - -
Lapu5g00211 1386 ProSiteProfiles Protein kinase domain profile. 521 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00211 1386 Gene3D Ribonuclease Inhibitor 1206 1324 IPR032675 -
Lapu5g00211 1386 Gene3D Ribonuclease Inhibitor 303 424 IPR032675 -
Lapu5g00211 1386 SMART LRR_typ_2 389 412 IPR003591 -
Lapu5g00211 1386 SMART LRR_typ_2 1266 1289 IPR003591 -
Lapu5g00211 1386 SMART LRR_typ_2 365 388 IPR003591 -
Lapu5g00211 1386 SMART LRR_typ_2 1290 1314 IPR003591 -
Lapu5g00211 1386 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 602 809 - -
Lapu5g00211 1386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Lapu5g00211 1386 Pfam Protein tyrosine and serine/threonine kinase 523 787 IPR001245 GO:0004672|GO:0006468
Lapu5g00211 1386 SMART serkin_6 521 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00211 1386 Pfam Malectin-like domain 868 1188 IPR024788 -
Lapu5g00211 1386 Pfam Malectin-like domain 3 288 IPR024788 -
Lapu5g00211 1386 SUPERFAMILY L domain-like 1214 1315 - -
Lapu5g00211 1386 ProSitePatterns Protein kinases ATP-binding region signature. 527 548 IPR017441 GO:0005524
Lapu5g00211 1386 Pfam Leucine Rich Repeat 368 387 IPR001611 GO:0005515
Lapu5g00211 1386 PANTHER OS07G0107800 PROTEIN-RELATED 11 800 - -
Lapu5g00211 1386 SUPERFAMILY L domain-like 310 410 - -
Lapu5g00211 1386 ProSiteProfiles Leucine-rich repeat profile. 367 389 IPR001611 GO:0005515
Lapu5g00211 1386 Pfam Leucine rich repeat 1247 1303 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00211 Lapu-Chr5 1731793 1749556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00211 2 831 Receptor kinase-like Gene Family AT1G51800 47.692 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu5g00211 Malectin_like 4e-96 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00211 - - gmx:100785345 1261.13