Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00210 GAGTTACATTCTTTGTTTAACAGATACTACATAACCAGTAGATTAACAGAGAAGAGCGATATATATAGCTTTGGTGTGGTTGTTATGGAGATAATCACAAGTCAACCAGGGATAGTAAAGAATCAAGAAAAGACACACATAAGCCAATGGGTTAGCTCCTTGATTGAAAAAGGTGATATGCATGCCGTTGTTGACTCAAGGTTAGAAGGAGATTTTGATAGTAACTCGGTTTTGAAAGCAGTAGAAATAGCAACAGCTTGTGTGTCTCCAAATCCTGAAAGAAGGCCAGTCATAAGTGTGATAGTGAATGAACTGAAGGAGTGTTTAGCCATGGAATTAGGTCGAACTAAATATAGTGGTGCCGATACAACCGATTCAGTTAAACTGGTCGCCATGACTCTGAGTACGAAA 411 0.3893 ELHSLFNRYYITSRLTEKSDIYSFGVVVMEIITSQPGIVKNQEKTHISQWVSSLIEKGDMHAVVDSRLEGDFDSNSVLKAVEIATACVSPNPERRPVISVIVNELKECLAMELGRTKYSGADTTDSVKLVAMTLSTK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00210 137 PANTHER OS07G0107800 PROTEIN-RELATED 8 109 - -
Lapu5g00210 137 SUPERFAMILY Protein kinase-like (PK-like) 12 111 IPR011009 -
Lapu5g00210 137 Gene3D Transferase(Phosphotransferase) domain 1 7 128 - -
Lapu5g00210 137 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00210 137 Pfam Protein tyrosine and serine/threonine kinase 13 105 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00210 Lapu-Chr5 1727040 1727450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00210 9 135 Receptor kinase-like Gene Family AT1G51800 46.457 2.36e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu5g00210 PK_Tyr_Ser-Thr 7.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00210 - - gmx:100781785 200.675