Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00206 ATGGCCCTCAAATATTTGCCACCCTACACAATGTCGATGAGTTTCTTCGTTGTTTTTCTAGGTGGTCTACTGATTCAAGCCCAGGATCAATCAGGATTTATCAGCATAGATTGTGGAGCTCCAGAGGACACGGACTACACTGAGGAAAAAACAGGCATAACTTACACATCAGATGCCAATTTCATAAACACGGGTGTAAATAGGACAATAATACCTGAAACCGTCGATACTGTCTACCAAAGACAGATGATGAACGTGAGAAGCTTCCCGAAAGGAAAAAGGAACTGTTACAAAATAAGCATCAAAAGAGGTTCCACTTATCTCATCCGGACTAATTTTTTGTATGGAAATTATGATGGGCTGAATAAGGCACCAAAATTTGATATTCATCTCGGGGTTAACCGGTGGTATACAGTGAGTATAGACAATGCATCCACCCCCCAAGTCAATGAGATCATACATGTACCTTTACTGGATTATCTGCATATCTGTCTGGTTGACACAGGCCATGGGACACCCTTTATATCAGCTATAGAATTGAGGACTTTGAAAAATGGTACATACGTCCCTGAATTTGGATCACTGGAATATCACAACCGCTGGGATTTGGGTTCAGACAACAGCTACAGGTACAATGTTGATGTTTACGACCGTTTCTGGTATAACTATGGCGACAACAAAGATTGGAAACAAATAAATGCTTCAATTGCTGCTTATTCTTTTGCTCAGAATGATTACAAACCGCCAGGAATTGTCATGAGCACCGCAGTTACACCAGTAAATCCCAGTGCCCCATTGGTAATAAGCTGGGAGACACAAAATCCAACTGAACAATACTATGTTTACATGCACTTTGCCGAGATTGAAGTGCTAGCGAAGAATCAGACAAGAGAATTCAATATCACCCAGAATGGACAGCCATGGTATCAAAATTTGTCTCCAAAGTACCAGAGTTTGCTCACTATATATAGCAGGTCAGGCATCAGTGGGGAAAAAATTGAATATTCACTTGAGAAAGCCAAGAATTCAAGCCTTCCTCCCATCTTAAACGCAATTGAAATTTACAGAGTGATAAACTTCAACCAGACAGATACACACCAAGGAGATGTTTATGCGATTACAACCATCCAGTCAATATATGGACTTACAAGAGATTGGCAAGGTGATCCATGCGCCCCTGTAGCCTATTTGTGGGATGGTCTCAATTGTAGTTATCACCTAAATGAGTCCCCAAGAATCACAACTTTGAATTTATCTTCAAGCGAATTGTCAGGAACGATAGATCTTACGATTTCAAATCTCACCATGTTGGAGACGTTGGATTTATCCAACAATAACTTAAACGGCGAAGTTCCTGATTTTCTATACAGATTACAACATCTGAAGATGATAAATCTTGAGAACAACAACCTCACTGGTTCAATTCCCTCAGCACTAGTAAGAAAATCTAAGGAAGGTTTCCTATCACTAAGTGTGGGCCAAAATCCATATCTATGTGAATCCGGTCAATGCAACGAGAAGAGAAAGAAAAAGAAGAACATTGTTACTCCCTTATTAGCATCGGTTTGTGGGGTTTTGATCCTTGTGATAGCTGTGGCAGCTGTATGGTGGGCTCTTAAAAAGAGAAAACCCAAAGCTTTGACCATAGATCAACGTGAGATGGCACCGCAATATACAGAACAAGATGGTTCATTACATCCACTCAAAAAACAAACATATTCATACTCTGATGTACTTAGAATCACCAACAATTTCAATACGGTTGTTGGTAAAGGTGGGTTTGGAACAGTTTATCTGGGTTATATCGGTGACACTCCCGTGGCAGTGAAAATGCTTTCTCCATCTTCTGTTCATGGTTATCGACAATTTCGAGCAGAAGTTAAAATTCTAATGAGAGTTCACCATACAAATCTCACCTCCCTTGTTGGTTATTGTGATGACGGAGATTACAAGGGCCTCATCTATGAGTACATGGCTAACGGAGACTTACAAGAACATCTGTCTGGTAGACACAGCAAATCAAAATTCTTGAGCTGGGAAGACAGACTTCGTATTGCAGTGGATGCAGCCCTAGGACTGGAGTATCTTCAAACTGGTTGCAAGCCTCCTATAATCCATAGAGACATAAAATCTACGAACATATTGTTGGATGAGAAGTTCCAAGCAAAATTATCTGATTTTGGTCTATCCAAAATTATCCCAATTGATGGGGGAACTCATGTGTCAACTGTTGTTGCTGGCACTCCCGGTTATCTAGACCCCGAATACTACATATCCAATAGATTAACACAGAAAAGTGATGTTTATAGCTTTGGAATTGTTCTTTTGGAAATGATCACTTATCAACCTGTAATAGCATGGAATGAAGAAAGGACTCACATCATTCAAAGGGTTAGATCACTGATTGAAAAAGGGGATATCAAGGCGATTGTTGACTCAAGGTTAGAAGGAGATTTTGACATTAATTCAGCTTGGAAAGCCGTAGAAATAGCAATGGCATGTGTTTCCTTAAATCCCAGTGAAAGGCCAATCATGAGGATGATAGTGACTGAACTAAAGGAGACTTTAGCAACCGAATTAGCCCGAACTAAACTCATTCATGCCGATCTAACAAGAGATTCAATTGAACCGCTCAACGTGAATTTGGACACTGAACTCACTCCTCTGGCGAGGTAA 2676 0.4028 MALKYLPPYTMSMSFFVVFLGGLLIQAQDQSGFISIDCGAPEDTDYTEEKTGITYTSDANFINTGVNRTIIPETVDTVYQRQMMNVRSFPKGKRNCYKISIKRGSTYLIRTNFLYGNYDGLNKAPKFDIHLGVNRWYTVSIDNASTPQVNEIIHVPLLDYLHICLVDTGHGTPFISAIELRTLKNGTYVPEFGSLEYHNRWDLGSDNSYRYNVDVYDRFWYNYGDNKDWKQINASIAAYSFAQNDYKPPGIVMSTAVTPVNPSAPLVISWETQNPTEQYYVYMHFAEIEVLAKNQTREFNITQNGQPWYQNLSPKYQSLLTIYSRSGISGEKIEYSLEKAKNSSLPPILNAIEIYRVINFNQTDTHQGDVYAITTIQSIYGLTRDWQGDPCAPVAYLWDGLNCSYHLNESPRITTLNLSSSELSGTIDLTISNLTMLETLDLSNNNLNGEVPDFLYRLQHLKMINLENNNLTGSIPSALVRKSKEGFLSLSVGQNPYLCESGQCNEKRKKKKNIVTPLLASVCGVLILVIAVAAVWWALKKRKPKALTIDQREMAPQYTEQDGSLHPLKKQTYSYSDVLRITNNFNTVVGKGGFGTVYLGYIGDTPVAVKMLSPSSVHGYRQFRAEVKILMRVHHTNLTSLVGYCDDGDYKGLIYEYMANGDLQEHLSGRHSKSKFLSWEDRLRIAVDAALGLEYLQTGCKPPIIHRDIKSTNILLDEKFQAKLSDFGLSKIIPIDGGTHVSTVVAGTPGYLDPEYYISNRLTQKSDVYSFGIVLLEMITYQPVIAWNEERTHIIQRVRSLIEKGDIKAIVDSRLEGDFDINSAWKAVEIAMACVSLNPSERPIMRMIVTELKETLATELARTKLIHADLTRDSIEPLNVNLDTELTPLAR* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00206 891 Pfam Leucine rich repeat 411 471 IPR001611 GO:0005515
Lapu5g00206 891 ProSiteProfiles Protein kinase domain profile. 583 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00206 891 CDD STKc_IRAK 589 854 - -
Lapu5g00206 891 PANTHER OS07G0107800 PROTEIN-RELATED 34 856 - -
Lapu5g00206 891 Gene3D Transferase(Phosphotransferase) domain 1 658 873 - -
Lapu5g00206 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 704 716 IPR008271 GO:0004672|GO:0006468
Lapu5g00206 891 Pfam Malectin-like domain 36 357 IPR024788 -
Lapu5g00206 891 SUPERFAMILY L domain-like 366 479 - -
Lapu5g00206 891 Gene3D Ribonuclease Inhibitor 373 486 IPR032675 -
Lapu5g00206 891 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 658 865 - -
Lapu5g00206 891 Pfam Protein tyrosine and serine/threonine kinase 585 852 IPR001245 GO:0004672|GO:0006468
Lapu5g00206 891 Gene3D Phosphorylase Kinase; domain 1 567 657 - -
Lapu5g00206 891 SMART serkin_6 583 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00206 891 SUPERFAMILY Protein kinase-like (PK-like) 565 852 IPR011009 -
Lapu5g00206 891 ProSitePatterns Protein kinases ATP-binding region signature. 589 610 IPR017441 GO:0005524
Lapu5g00206 891 Gene3D - 198 358 - -
Lapu5g00206 891 FunFam Leucine-rich repeat receptor-like kinase 369 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00206 Lapu-Chr5 1688433 1693927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00206 18 891 Receptor kinase-like Gene Family AT1G51800 49.046 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu5g00206 Malectin_like 5.1e-115 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00206 - - gmx:100795183 1441.02