LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu5g00205	ATGGATGGAAAATGGAGATGCCATTGGGCTTGGAGCTTCACCTTATGGTGTGTCCTTGCATATACCATTTCAGAATTTTGTGGAAAGTCCGTAGTTCTGGCCACAGAGAAAGACTCTATGCATCACAAACAAGGAAGAAGGAAACTAGATGATGTCACTGGTTCTATTTGCATTGACTGTGGGATAGCAGAAGAAGTTACCTATACTGATGAGAAAACAAAGATTCATTACACTTCAGATGCACAGTTCATTGGCACTGGAACAAGCAAAAACATATCCCTCAAGCTCATTTCTGAAATACCCCAAAGAATTTTCACTACTGTCAGAAGCTTCCCTGCGGAGAAAAGGAACTGCTACACACTACGACATCCGGAAGGAAGAAATACTATTTACTTGATAAGAGCTTCTTTTATGTATGGAAATTATGATGACTTGAATAAGCCGCCACAATTTGATCTTTATGTTGGGGTTAATTTTTGGGACTCTGTGATATTTGACAATGCCACTCACGTTGTAATCAAGGAGATTTTACATGTGCCATCCTTGGATGAATTATATATTTGTTTATTGGATACTGATAGGGGAACTCCTTTTATATCAGCACTGGAGGTGAGGCACTTTGATCATTCCAGTTATAGAACAGACTCTAAACTCTTATCCCTATATAGACGTTTTGACATTGGCTCAACAACCAATGAAATAGTGAGGTTTGAACAAGATGATTATGATCGAATGTGGTATCCTTACAACTTACCAGATTCTACACCACTCAGTACTTCCTTCGCCATTGACTCCTTGACACATACGGCATATCACCTTCCACCAGCAGTGATGCAAACTGCTGTGAGACCGACAAATGAAAATGATTCCCTGGAATTTGTTTTTGACACTGGGCATCCTACTTCAGATTCATATGTTTACATGCACTTTGCTGAAATCGAAGAGCTTAAGGAAAACGAAAGCAGGGTATTCGACATTACACTGAATGGAAAAATTTTGTCTGAATCTGTGACTCCCAAGTATTTGCTGTCAACTACGATAGATAATAAACAGGCCATTAGGGGAAGTAAGCTCAAGTTCTCCATGTACAAGAAACCAAATTCCACCCATCCTCCCATTCTAAATGCGATGGAGATTTATATTGTTAAAGAATTCCTGCAATCACCTACAAATCAAGAAGATGTTAAGGCTATCATGTTCATCAAATCATATTACAAGTTGATGTCTTCGTTGGGTAAATCTTGGCAAGGAGATCCTTGTGCACCATTAAAATACTCTTGGAATGGTCTCAACTGCAGCAATAATGGATATAAACCACCCACAATAACTGCATTAAACCTAGCCTCCAGTGGATTAGACGGTCCGATAATTGATTCCTTTTTGGAGCTCAAATTCTTAGAATTCTTGGATTTATCAAACAATAGCTTAACTGGACCGCTACCTGATTTTTCAAAGCTGCAATACTTAAAAACTCTCAATTTATCAGGGAACAGACTCTCGGGTGAAATTCCTCCACTTCTCTTGAAAAGATCAAATAATGGCTCCCTTTTGTTGAGTGTGGATCCGGATCTCTGCCCGATTGGCCCATGTGAAGAGGACAAAAAGAACATTGTCCCACTTGTTGTAGGCATTCTTTCAGCAGTAGTCTTTTTCATTGTATTGGGTATTGTACTGACTATCATTTGGAGGAGATGCAACAGAAAAGCAGCCTCAAAGCAAGCTGTGAGATCAAACGAAGAAGTTGTGCTGAAGACAAATAATAAACAGTTCTCGTACTCTCAGATAATGACCATAACCAATAACTTCGAGAAAACAATTGGGAAGGGAGGGTGTGGAATTGTTTATCTTGGTTCCTTACAGGATGGCACACAAGCTGCTGTCAAAATGCTCTTGCCAAAATCTCCTCAAGGATCTCATCAGTTTCAGACTGAGGCTCAACTCTTAATGCGTGTGCATCATAAGAACTTAGCTTCCTTCCTTGGATACTGTAATGAAGTTGGACACACAGCAATCATCTACGAATACATGACTTATGGTAACTTGGAGGATTATCTTTCAGATGCTAGGAGAGAACCGTTGAGTTGGAGACAGAGGATTCAGATAGCAGTTGATGCTGCTCAAGGTATCGAGTACTTGCATCACGGCTGCAAGCCGCCAATAGTCCATAGAGACATAAAGACTGCAAACATTTTACTGAATGAGAAAATGCAAGCAAAGGTAGCCGATTTTGGTTTCTCAAAACTTTTCTCAGCTGAAAACGAAAGTCATGTATCAACTGTAGTTATTGGCACGGTTGGATATCTTGATCCAGAATACTACATATCCAGCAGGCTGACTGAAAAAAGCGACGTTTATAGTTTCGGCATTGTGCTTTTGGAGCTAATTACTGGGCAGGCAGCTATAATAAAAGGTCATCAAAACACTCACATTGTGCAATGGGTTAACCACTTTCTGGAAAGGGGAGATATACAACAAATTGTTGATCCAAAGATGCATGGAGATTTTGACTTTGGTTCTATGTGGAAGGCCTTGGAAGCAGCAGTAGCTTGTGTGCCTTCAATGTCTATCCAAAGGCCATCAATGAATCACATTGTCGCTGAACTGAAAGAGTCCTTAAAAATGGAAACAACTCGAGAACAAGAAGGCATCAACTCTATTGAAATGAATGTTGTTGATCTTGAAGCTCATTGTGGCCCGGATGCAAGATAG	2709	0.4001	MDGKWRCHWAWSFTLWCVLAYTISEFCGKSVVLATEKDSMHHKQGRRKLDDVTGSICIDCGIAEEVTYTDEKTKIHYTSDAQFIGTGTSKNISLKLISEIPQRIFTTVRSFPAEKRNCYTLRHPEGRNTIYLIRASFMYGNYDDLNKPPQFDLYVGVNFWDSVIFDNATHVVIKEILHVPSLDELYICLLDTDRGTPFISALEVRHFDHSSYRTDSKLLSLYRRFDIGSTTNEIVRFEQDDYDRMWYPYNLPDSTPLSTSFAIDSLTHTAYHLPPAVMQTAVRPTNENDSLEFVFDTGHPTSDSYVYMHFAEIEELKENESRVFDITLNGKILSESVTPKYLLSTTIDNKQAIRGSKLKFSMYKKPNSTHPPILNAMEIYIVKEFLQSPTNQEDVKAIMFIKSYYKLMSSLGKSWQGDPCAPLKYSWNGLNCSNNGYKPPTITALNLASSGLDGPIIDSFLELKFLEFLDLSNNSLTGPLPDFSKLQYLKTLNLSGNRLSGEIPPLLLKRSNNGSLLLSVDPDLCPIGPCEEDKKNIVPLVVGILSAVVFFIVLGIVLTIIWRRCNRKAASKQAVRSNEEVVLKTNNKQFSYSQIMTITNNFEKTIGKGGCGIVYLGSLQDGTQAAVKMLLPKSPQGSHQFQTEAQLLMRVHHKNLASFLGYCNEVGHTAIIYEYMTYGNLEDYLSDARREPLSWRQRIQIAVDAAQGIEYLHHGCKPPIVHRDIKTANILLNEKMQAKVADFGFSKLFSAENESHVSTVVIGTVGYLDPEYYISSRLTEKSDVYSFGIVLLELITGQAAIIKGHQNTHIVQWVNHFLERGDIQQIVDPKMHGDFDFGSMWKALEAAVACVPSMSIQRPSMNHIVAELKESLKMETTREQEGINSIEMNVVDLEAHCGPDAR*	903

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu5g00205	902	PANTHER	OS07G0107800 PROTEIN-RELATED	56	872	-	-
	Lapu5g00205	902	CDD	STKc_IRAK	606	870	-	-
	Lapu5g00205	902	FunFam	Leucine-rich repeat receptor-like kinase	393	522	-	-
	Lapu5g00205	902	Gene3D	Transferase(Phosphotransferase) domain 1	676	895	-	-
	Lapu5g00205	902	Pfam	Malectin-like domain	58	381	IPR024788	-
	Lapu5g00205	902	SMART	serkin_6	600	866	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu5g00205	902	ProSiteProfiles	Protein kinase domain profile.	600	872	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu5g00205	902	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	676	881	-	-
	Lapu5g00205	902	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	720	732	IPR008271	GO:0004672\|GO:0006468
	Lapu5g00205	902	PRINTS	Leucine-rich repeat signature	486	499	-	-
	Lapu5g00205	902	PRINTS	Leucine-rich repeat signature	466	479	-	-
	Lapu5g00205	902	SUPERFAMILY	L domain-like	412	510	-	-
	Lapu5g00205	902	Gene3D	-	223	382	-	-
	Lapu5g00205	902	ProSiteProfiles	Leucine-rich repeat profile.	465	487	IPR001611	GO:0005515
	Lapu5g00205	902	Gene3D	Phosphorylase Kinase; domain 1	582	675	-	-
	Lapu5g00205	902	Pfam	Protein tyrosine and serine/threonine kinase	602	815	IPR001245	GO:0004672\|GO:0006468
	Lapu5g00205	902	ProSiteProfiles	Leucine-rich repeat profile.	488	510	IPR001611	GO:0005515
	Lapu5g00205	902	SUPERFAMILY	Protein kinase-like (PK-like)	580	868	IPR011009	-
	Lapu5g00205	902	Gene3D	Ribonuclease Inhibitor	393	517	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu5g00205	Lapu-Chr5	1671387	1675584	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu5g00205	48	902	Receptor kinase-like Gene Family	AT2G19210	46.605	0.0	780

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Lapu5g00205		Malectin_like	1.2e-107	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu5g00205	-		-	gmx:100791717	1576.99