Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00186 ATGATATGGGAGCGGCGGGGCCTGCGTTCCAATGCGGAAGTGTCAGAAGAGCCGCGGGAAAAAGGAGAATTTGCAGAAATCGTGTGTGTGGGGCTTCCAAAGATGACGATCGGTGAAGCGGCGTCGTTTTGGCTCTTTCTGAGGCTGCGAGAGGCAGCGCAACAAGCTTCAGGTGTTGGTGGGAGTCAGATCGTTGGTGTTCTTAGCATGAGGTTGGTGTCCGAGGGCCTGATCTCGAAGGATTTGATGTTTTGTGGGTGTGTGTTAAGTTGTGTAGGTATGGCAATGTCCTGCAAGGATGGTAAACCAGGATTGGATAACGGGAAATATGTCCGTTACACGCCTGAGCAGGTTGAAGCCCTCGAGAGGCTTTATCATGACTGCCCCAAACCCAGTTCCATTCGCCGCCAGCAGCTCATTCGTGAGTGCCCTATTCTCTCCAACATTGAGCCTAAGCAAATCAAAGTTTGGTTTCAGAACAGAAGGTGTAGAGAGAAGCAGAGAAAAGAGGCCTCGCGGTTGCAAGCTGTAAATAGGAAGCTCACAGCCATGAACAAGCTTCTCATGGAGGAGAATGATAGGTTGCAGAAGCAGGTGTCTCAGTTGGTTTACGAAAATGGTTACTTTCGCCAACACACTCAGAATACTGCGCTTCCAACCAAAGACACGAGCTGTGAATCGGCGGTGACTAGTGGTCAACGTAGTTTGACAACCCAGCATCCCCCAAGGGATGCAAGTCCTGCAGGGCTTATGTCCATTGCAGAAGAGACTTTAGCAGAGTTTCTTTCGAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCAAGAGCCTGCGGCCTTGTCGGTTTAGAACCCACAAGGGTTGCAGAAATCCTCAAAGATCGGCCTTCATGGTTTCGTGATTGCCGAGCTGTGGATGTTCTGAATGTGCTGCCCACAGCAAATGGTGGAACCATAGAGCTGCTTTATATGCAGCTATATGCACCAACCACGTTGGCACCTGCCCGTGACTTCTGGTTGTTGCGCTACACTTCTGTTTTAGAAGATGGGAGCCTTGTGATCTGTGAGAGGTCTCTTAAAAATACACAAAATGGTCCAACCATGCCTCCCGTGCAGCATTTTGTTAGAGCAGAGATGCTTCCTAGTGGGTACCTAATAAGACCCTGTGAGGGAGGTGGTTCTATCATTCACATTGTTGATCACATGGATTTGGAGCCATGGAGTGTTCCTGAAGTACTGCGACCATTGTATGAATCATCGACAGTGTTGGCTCAGAAGACAACTATGGTGGCACTACGTCAACTAAGGCAGATTTCACATGAAGTTTCTCAGTCTAATGTCACTGGGTGGGGGAGACGACCGGCAGCTCTTCGAGCACTAGGCCAGAGACTCAGCCGTGGCTTCAATGAGGCGATCAATGGGTTCACTGATGAGGGATGGTCAATGATAGGCAATGATGGTGTTGATGATGTTACTGTTCTAGTGAATTCATCACCTGACAAGTTAATGGGTTTGAATCTTTCCTTTGCCAATGGATTTCCATCTGTCAGCAACGCAGTCTTGTGTGCCAAAGCTTCAATGCTATTACAGAATGTGCCTCCGGCCATACTACTGAGGTTTCTTCGGGAGCATAGATCAGAATGGGCAGACAACAACATGGATGCTTATTCAGCGGCTGCCATTAAAGTTGGTCCTTGTGGCTTACCGGGATCTCGTGTTGGAAATTATGGGGGTCAAGTTATTCTTCCTCTAGCCCACACCATCGAGCATGAGGAGTTTCTTGAAGTTATCAAGTTAGAAGGAATTGCTCATTCTCCTGAAGACGCAATGATGCCCAGAGAAGTGTTTCTTTTGCAACTGTGCAGTGGAATGGATGAAAATGCTGTTGGAACCTGTGCAGAACTTATATTTGCTCCAATTGATGCATCCTTTGCTGATGATGCCCCCCTTCTGCCTTCTGGATTTCGCATCATTCCTCTTGATTCTGCAAAGGAAGCATCCAACCCAAATCGCACACTTGACCTAGCTTCTGCTCTTGACGTTGGTCCCACTGGCAACAGAGCATCAAATGATTATTCTGGAAATTCTGGTTCTATGAGATCTGTGATGACAATAGCATTTGAATTTGCATTTGAAAGTCATATGCAAGATCATGTAGCATCCATGGCTCGACAATATGTTCGAAGCATTATATCATCTGTCCAAAGGGTAGCATTAGCACTTTCTCCTTCTCATTTAAGTTCACAAGCTGGGCTTAGAACACCACTGGGTACCCCTGAAGCGCAAACACTAGCTCGCTGGATCTGCAATAGTTATAGGTGCTACTTGGGTGTCGAGCTACTTAAATCTAATAACGAAGGGAACGAATCTTTGCTGAAGTCCTTGTGGCATCACTCAGATGCAATATTGTGCTGCACCCTAAAGGCATTGCCTGTTTTCACTTTCGCCAACCAGGCAGGGCTTGACATGCTGGAGACCACCTTAGTTGCTTTACAGGATATAACATTGGAGAAGATATTCGATGATCATGGCCGAAAGATTCTGTGCTCAGAGTTTCCCCAAATTATTCAACAGGGTTTTGCATGCCTTCAAGGTGGTATATGTCTCTCAAGCATGGGGAGACCCATCTCATATGAAAGAGTAGTAGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCACTGTATTTGCTTTATGTTTATGAACTGGTCTTTCGTTTGA 2793 0.4705 MIWERRGLRSNAEVSEEPREKGEFAEIVCVGLPKMTIGEAASFWLFLRLREAAQQASGVGGSQIVGVLSMRLVSEGLISKDLMFCGCVLSCVGMAMSCKDGKPGLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTALPTKDTSCESAVTSGQRSLTTQHPPRDASPAGLMSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMVALRQLRQISHEVSQSNVTGWGRRPAALRALGQRLSRGFNEAINGFTDEGWSMIGNDGVDDVTVLVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCGLPGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPEDAMMPREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEASNPNRTLDLASALDVGPTGNRASNDYSGNSGSMRSVMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVALALSPSHLSSQAGLRTPLGTPEAQTLARWICNSYRCYLGVELLKSNNEGNESLLKSLWHHSDAILCCTLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKILCSEFPQIIQQGFACLQGGICLSSMGRPISYERVVAWKVLNEEENAHCICFMFMNWSFV* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00186 930 Gene3D - 287 465 IPR023393 -
Lapu5g00186 930 FunFam homeobox-leucine zipper protein ATHB-15 288 469 - -
Lapu5g00186 930 Coils Coil 164 205 - -
Lapu5g00186 930 ProSiteProfiles START domain profile. 243 458 IPR002913 GO:0008289
Lapu5g00186 930 CDD bZIP 161 200 - -
Lapu5g00186 930 SUPERFAMILY Bet v1-like 252 441 - -
Lapu5g00186 930 Pfam MEKHLA domain 787 929 IPR013978 -
Lapu5g00186 930 FunFam Homeobox-leucine zipper protein REVOLUTA 109 164 - -
Lapu5g00186 930 SUPERFAMILY Homeodomain-like 106 172 IPR009057 -
Lapu5g00186 930 SMART HOX_1 106 172 IPR001356 GO:0003677
Lapu5g00186 930 SMART START_1 252 462 IPR002913 GO:0008289
Lapu5g00186 930 ProSiteProfiles 'Homeobox' domain profile. 104 168 IPR001356 GO:0003677
Lapu5g00186 930 CDD homeodomain 109 169 IPR001356 GO:0003677
Lapu5g00186 930 CDD START_ArGLABRA2_like 247 462 - -
Lapu5g00186 930 MobiDBLite consensus disorder prediction 219 242 - -
Lapu5g00186 930 Pfam START domain 253 461 IPR002913 GO:0008289
Lapu5g00186 930 Pfam Homeodomain 109 167 IPR001356 GO:0003677
Lapu5g00186 930 MobiDBLite consensus disorder prediction 219 247 - -
Lapu5g00186 930 Gene3D - 105 175 - -
Lapu5g00186 930 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 105 930 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00186 Lapu-Chr5 1486102 1493932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00186 94 882 Homeobox Transcription Factor Family AT1G52150 86.616 0.0 1430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lapu5g00186 START 1.9e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00186 K09338 - zju:107428556 1603.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00186 5 1486102 1493932 Lapu5g00186 5 1486102 1493932 ECH
Lapu5g00186 5 1486102 1493932 Lapu10g00538 10 7693672 7701879 PCT