Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00169 ATGATGACCGGGTTTCCTAACTGGTGGAGCATGCATCCACCATCTGTGATTCCTCCCCAATATGTGCTTCCACCTTCTTCAATTTCTTTTAATTTTTTGACTGAAAATCCAGAGCCTCCTCAGTCATGGACCCAACTGCTTTCTACCGGATTACCAGGAGAAGAAGATAAGCTTGGTTTCGTTGATTTTCAGCCGAAAGAGTTGGGAAACTGGGATGTCGAAATTCTTAATACTACTTCCGAAGTTTCTAATAATTTTGGCATAATAAAGCAAGAAAATTCTGGAAGGGGCAATTTGTACGAACATGGGCGTGAAGCATTTCAGGCTTCGGGTCTGGCTGACTCATCTTGGTCACATATGCCTGTTTCTTCCCCCGGGTCTTCTTCTGTCACTAGCATCAGTTGTAATAATATATTGGATTTCACTTATAACAAGTCAGATCATAGAAGTAATCTTCTACAAGACCAAATATCCGAGTGTAATAACACAGCCACAGTTGGAGTTTGTAAGAAACCTAGGGTTCAGCCATCTTCAAGTCAAGCACCTCTCAAGGCACCAAAGGAGAAGCTAAGTGATAGAATAACAACCCTTCACCGACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATAGGATATATAAGGTTCCTGCAGGGTCAAATTGAGGCACTGAGCTCTCCTTACTCGGACGATGCATCAAAAAACAAGGGGAATCAACAGTCTGTGCATGGAGAAAGAACTTGTGCTTTTCCAGAGGACCCCGGTCTGCTGTTGGATGACAATAATGGCCTGAAAAGAAAGAGAGCTCCAAACCAGGATGCAGATAAACCAAAGGACTTGAAGAGTAGAGGGTTGTGCTTGGTCCCGGTGTCTTGTACCCAACATGTTGTGAGCCAAAATGACTGGGGCACCCGCATATACGGAAGAGAATTTTAA 954 0.4371 MMTGFPNWWSMHPPSVIPPQYVLPPSSISFNFLTENPEPPQSWTQLLSTGLPGEEDKLGFVDFQPKELGNWDVEILNTTSEVSNNFGIIKQENSGRGNLYEHGREAFQASGLADSSWSHMPVSSPGSSSVTSISCNNILDFTYNKSDHRSNLLQDQISECNNTATVGVCKKPRVQPSSSQAPLKAPKEKLSDRITTLHRLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYSDDASKNKGNQQSVHGERTCAFPEDPGLLLDDNNGLKRKRAPNQDADKPKDLKSRGLCLVPVSCTQHVVSQNDWGTRIYGREF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00169 317 MobiDBLite consensus disorder prediction 233 251 - -
Lapu5g00169 317 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 74 301 - -
Lapu5g00169 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 234 IPR036638 GO:0046983
Lapu5g00169 317 CDD bHLH_AtbHLH_like 187 231 IPR045239 -
Lapu5g00169 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Lapu5g00169 317 MobiDBLite consensus disorder prediction 265 286 - -
Lapu5g00169 317 MobiDBLite consensus disorder prediction 233 286 - -
Lapu5g00169 317 Gene3D - 184 247 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00169 Lapu-Chr5 1373707 1377004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00169 32 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.353 1.56e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00169 - - vun:114183597 446.432