Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00154 ATGAACGGTGCTGGGAGACAGGGCCTGAGATCTGGTGCGGCGGGTGTGCACCACCAGCGCCAGTACTCCGATAACTTCCTCGACGGCTCCTCCAACGGCAACAGGTGGCTCCAATCGGCTGGCCTCCAACACCTTCAATCCTCCACCAATCAACTTCCTCCGCTTCAGGACTATAACTTATACGGCGGGGGCGGAGCGCAGGGAGGAAGAATGTACCGGAACGCACCGAGGAGCTTTAACGGAGGAACTGAGTATTATGTGGAGCCTTCCACTCCTCCCGGTGGTTACCGTGCTGCGGTGCAGAAAAAGAACGGTGATGATTTGACTGGTGATTTCAGCCCTGGCTTGTTGGATCTGCATTCGTTTGACACCGAGCTTCTTCCTCCTGAGATGCCAGTCTCCAATGCATATGATGCAAACTCCCTGTATCAACCTGGCCGGGGGAGAAGCTTTGATGACTCTGAACCTTACATGTTGAGCAAACAGACTGGCAGAGCCCGTGCTCCTGAAAACATATCGAAGAGTTTTCCTGCAGAAAAAGAGAAATCTAATTCTGTAGCAAAGATTAAAGTTGTGGTTCGAAAAAGACCAATGAATAAGAAAGAATTAGCAAAAAATGAGGAAGACATTATAGAAACATATTCAAATTCTTTAACAGTGCATGAGACTAAACTGAAGGTGGACTTAACTCAGTATGTAGAAAAGCATGAATTTGTTTTTGATGCTGTTTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATTGTTCCAATCATTTTTGAACGCACTAAGGCAACATGCTTTGCATATGGACAAACAGGAAGTGGAAAAACTTTCACTATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTTAGATTGATGCATCATACTTACAGAAACCAGGGATTTCAATTGTTTGTGAGCTTCTTTGAAATATATGGTGGCAAACTTTTTGATCTTCTTAATGATCGAAAAAAACTCTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGCTTGCAAGAGTACAGAGTCTCAGACGTGGAGAACATCAAAGAACTGATTGAGAAAGGAAATTCCACAAGAAGTACAGGCACCACAGGTGCAAATGAGGAATCATCACGGTCACATGCAATACTTCAACTTGCTATCAAGAGGTCAGTTGATGGAAATGAATCCAAACCTCCCCGTTTGGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGCGAACGCGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCTCTAAAGGAATGCATTAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAACTCCCGCACCGTTATGATTTCATGCATATCTCCAAGCACTGGTTCATGCGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCCTGTCGAAAGGGAACAACACAAAGAAAGAAGCTATATCATCAAATTTCAACCTTAAAGAATCAACCACTGTTCCGTTATCTTCCATTACTGGATCAGCCTATGAGGATCGCACAGCAGATGGATGGCCTGATGAAAATGAAGGGGATGATTTTAGTCCCCCTGAAGAGTATTACGAGCAGGTGAAACCATCTTTGAAGAAAAATGGAAAGGTGGATTCATATGCTACAACAGATGACAAATTGAAGAAACCCAGTGGTCTGATGAAGTGGAAGGACCTCCCAAAAGTTGAGCCTCAAACCACACACGCTGAGGACGATTTAAATGCTCTCTTACAGGAAGAAGAGGACCTAGTAAATGCTCACCGGACGCAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAACTGGATGATTATATAACAAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATCCTGCAGTTGCAAACACGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCTACCACCGGTTACTGA 2115 0.4392 MNGAGRQGLRSGAAGVHHQRQYSDNFLDGSSNGNRWLQSAGLQHLQSSTNQLPPLQDYNLYGGGGAQGGRMYRNAPRSFNGGTEYYVEPSTPPGGYRAAVQKKNGDDLTGDFSPGLLDLHSFDTELLPPEMPVSNAYDANSLYQPGRGRSFDDSEPYMLSKQTGRARAPENISKSFPAEKEKSNSVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTFTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKELIEKGNSTRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSKGNNTKKEAISSNFNLKESTTVPLSSITGSAYEDRTADGWPDENEGDDFSPPEEYYEQVKPSLKKNGKVDSYATTDDKLKKPSGLMKWKDLPKVEPQTTHAEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTTGY* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00154 704 MobiDBLite consensus disorder prediction 367 386 - -
Lapu5g00154 704 CDD KISc_KIF2_like 188 509 - -
Lapu5g00154 704 ProSitePatterns Kinesin motor domain signature. 410 421 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu5g00154 704 PANTHER KINESIN-RELATED PROTEIN 6 572 698 IPR027640 GO:0003777|GO:0007018
Lapu5g00154 704 SMART kinesin_4 186 517 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00154 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 511 IPR027417 -
Lapu5g00154 704 Pfam Kinesin motor domain 194 510 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00154 704 ProSiteProfiles Kinesin motor domain profile. 188 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00154 704 MobiDBLite consensus disorder prediction 366 386 - -
Lapu5g00154 704 PRINTS Kinesin heavy chain signature 411 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00154 704 PRINTS Kinesin heavy chain signature 268 289 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00154 704 PRINTS Kinesin heavy chain signature 377 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00154 704 PRINTS Kinesin heavy chain signature 461 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00154 704 Gene3D Kinesin motor domain 166 514 IPR036961 -
Lapu5g00154 704 FunFam Kinesin-like protein 169 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00154 Lapu-Chr5 1263736 1268884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00154 188 511 Calmodulin-binding Proteins AT5G65930 34.132 1.05e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00154 K10393 - gmx:100799100 1341.25