Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00153 ATGGAGTTTTGGCCAGAGTTTCTTGCGAGCAGCACGGGAAAAGAGTTTGTAGCAGGAGGTTTTGGGGGCACTGCTGGCATAATCTCTGGTTACCCATTAGACACGCTTCGTGTGATGCAGCAGAACTCCTTCAACACTGCCTCTGCCTTCACCATCCTCAGAAAAGTGGTGGCCAATGAAGGACCAACCGCTCTCTACCGCGGCATGGCTGCACCTTTGGCCTCTGTTACTTTTCAGAATGCTATGGTTTTCCAAATTTACGCAATTCTTTCGAGGGCATTTAGTTCATCGGATTTGGTTAACGATCCTCCTTCTTACAAAGGTGTTGCTTTAGGCGGATTTTGTAGCGGCGCCATACAGAGTATGTTGCTATCCCCTGTTGAGTTAGTTAAAATTCGGCTTCAGTTGCAGAACACAGGTCAATCCATAGAAACCCAAAAAGGTCCTATGAGGGTAGCCAAAAACATATGGAAAATAGAGGGTCTTCGTGGCATTTATCGAGGACTTGGGATCACCATGCTAAGAGATGCACCTGCACATGGTCTTTACTTTTGGACATATGAGTATGCTAGGGAGAAACTTCACCCGGGTTGTAGAAGAAGTTGTGAAGAGAGCTTGAATACAATGCTGGTATCAGGAGGATTAGCTGGGGTAGTGAGTTGGGTTTTGAGCTACCCTTTAGACGTTATAAAGACAAGATTGCAGGCTCAAACACTTTCTTCAGAAAAATACAGAGGCATTTTGGATTGCCTTTGGAAGAGTGTTAAAGAAGAAGGGTACGAGGTGCTATGGAGGGGTTTAGGAACTGCGGTTGCTAGAGCGTTTGTGGTTAACGGTGCTATATTTTCTGCATATGAGATCACTCTAAGGTGTCTGTTTGACAATAAAAACTGA 894 0.4508 MEFWPEFLASSTGKEFVAGGFGGTAGIISGYPLDTLRVMQQNSFNTASAFTILRKVVANEGPTALYRGMAAPLASVTFQNAMVFQIYAILSRAFSSSDLVNDPPSYKGVALGGFCSGAIQSMLLSPVELVKIRLQLQNTGQSIETQKGPMRVAKNIWKIEGLRGIYRGLGITMLRDAPAHGLYFWTYEYAREKLHPGCRRSCEESLNTMLVSGGLAGVVSWVLSYPLDVIKTRLQAQTLSSEKYRGILDCLWKSVKEEGYEVLWRGLGTAVARAFVVNGAIFSAYEITLRCLFDNKN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00153 297 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Lapu5g00153 297 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085
Lapu5g00153 297 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Lapu5g00153 297 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Lapu5g00153 297 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Lapu5g00153 297 Gene3D Mitochondrial carrier domain 9 297 IPR023395 -
Lapu5g00153 297 FunFam Mitochondrial arginine transporter BAC2 11 297 - -
Lapu5g00153 297 Pfam Mitochondrial carrier protein 110 194 IPR018108 -
Lapu5g00153 297 Pfam Mitochondrial carrier protein 11 96 IPR018108 -
Lapu5g00153 297 Pfam Mitochondrial carrier protein 209 295 IPR018108 -
Lapu5g00153 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 193 IPR018108 -
Lapu5g00153 297 SUPERFAMILY Mitochondrial carrier 12 286 IPR023395 -
Lapu5g00153 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
Lapu5g00153 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 93 IPR018108 -
Lapu5g00153 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00153 Lapu-Chr5 1259527 1261988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00153 1 295 Antiporters AT1G79900 69.831 2.83e-142 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00153 K15109 - gmx:100812034 531.946