LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu5g00151	ATGAGGAGAAGTGTGCTTCCCTCTGTATTGTTCCTTCTTCTACTTCACCCCTCTGAAGGTGAACACATTGCCATTTACTGGGGTCAAAACGGCAATGAGGGAAACCTTACCGAAACGTGTGCAACAGGAAAATACTCCTACGTCAACATAGCTTTCCTTTCCACCTTTGGGAATGGCCAAACCCCAAAACTGAACCTGGCTGGCCATTGTGACCCGTCTTCTAACGGGTGTCATAAGCTGGGAAGAGAAATTAGGAATTGTCAAGAGCAAGGGATCAAGGTGATGCTTTCTATCGGAGGAGGAAGTGGTAATTATTCTCTAACTTCCCTTGAGGATGCCAAGAATGTTTCGGATTACTTGTGGGACAATTTCCTGGGTGGCTCATCCTCATCACGCCCATTTGGGGATGTAGTCTTAGATGGCACAGGCAGAGTGTACCTGTCAGCAGCTCCTCAGTGTCCATTTCCTGATACTATGCTGGATTCGGCCCTTGCAACTGGCGTTTTTGACTACGTCTGGATACAGTTCTACAACAATCTTCCATGCGAATATACCCAAAACAATTTCGATAACCTCATTAAAACATGGAACCAATGGTCCACGTCATTGAATGCAGGGAAAATATTTCTGGGGTTACCAGCAGATCAAAGTGCAGCTGGAAGCGGTTATGTTCCAACTGATGTATTAATTTCTAAGATCTTGCCTGCAATAAACAAGTCACCAAATTATGGAGGTATCATGTTGTGGTCAAGGTACGAAGATAAAATGAGTGGATACAGCTCCTACATTCAAAATTTTCAAATAAATCAGACTGCAAACTCTCTATGCACACAGCAAAGCCTCCCTGCATGCAGCAGCTCTAAAGATGGTTTCGTGGAAAGTGTTGGTAACATGTCCAGCACAGGCATACAAGTTTATGCTGGCGACAACGGTACGCAGTGCTGTGAGATCATATGTAGGAACAATTGTTCCTGTCAAGCATATGCCCCGATTAACCGCAAAAACAATACTGGATGCCAGATATGGCTCAAAGGAACAAAATTCGTTAGCGGTTCTGTAGACATAGCACTGCCTATCTATGTTTCTGTTGCATTGCTCCCAGAAGTCAAAGGTACGTCCAGATTCCCTACCACAACAAGTGGCCGGTGGTACATATGGCTCATCGTTGGGGTGGCAGCAGCATTTGCAATACCTGTAATTTTCTATTTATGGCGTGCCTTGTGGAGAAATTACAAAGCTAAAGTGGAGAGGAAGAAGATGCAGAAGAAGTTATTGCATGACATTGGAGGTAATTCTATAAAAAGTAAGAAAAAGGGAAAGACAAGCAATGGGGTTGAAGTATTCACGTTTGAAACCATTGCTGCTGCAACAGAGAATTTCTCAGAGGCTAATAAGCTAGGAGAGGGTGGATTTGGTCCTGTTTACAAGGGAACGCTACGTGATCAGCAAGAAGTAGCAATCAAGCGACTTTCTAAAACTTCAGGACAGGGGTTAATGGAATTTAAGAATGAGGCAAAACTTATGGCCAAACTCCAACACACTCATCTTGTAAAGCTTCTAGGGTTCTGCATCGAGAGAGATGAAAGAATATTGGTTTATGAGTACATGCCTAACAAGAGCTTAGACTTCTACCTATTTGATTCAGCTAGAAAGAATTTGTTAGACTATGAAACACGGTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTACACAAGTACTCGAGACTGAAGGTGATACATCGAGACCTGAAAGCAGGTAATATATTGCTTGATCACGAGATGAATCCCAAGATATCTGACTTTGGCATGGCTCGGATATTCGGTGTGAGAGCATCAGAAGAAAACACAAACAGAGTTGTTGGTACATATGGATACATGGCTCCAGAGTATGCAATAAACGGTGTTGTGTCCATCAAAATTGATGTATTCAGCTTTGGTGTACTGCTACTAGAAATACTTAGTGGCAAGAAAAATAATAGTCGTTATGATTCTGATCGTCCACTCAACCTCATAGGATATGCATGGCAGCTCTGGAATGAAGGTAGAGCTATGGAGTTAATAGACACAGATTGGCATGATTTATGTTCTCAGAGTGCAGTTTTGAGATGTATTCATATCGGCCTGCTGTGTGTGCAAGATCAAGCAACAGACAGACCAACCATGGCAGACATTGTTTCATTTCTATCGAATGATACAATCCAACTTCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTGGTTGTCCAAGACTCAGAGCTTCCTTACAGCAGGCAAGAACTTCATTCCTGTAATGACTTAACAGTTTCTAGCACACATGGAAGATAA	2337	0.427	MRRSVLPSVLFLLLLHPSEGEHIAIYWGQNGNEGNLTETCATGKYSYVNIAFLSTFGNGQTPKLNLAGHCDPSSNGCHKLGREIRNCQEQGIKVMLSIGGGSGNYSLTSLEDAKNVSDYLWDNFLGGSSSSRPFGDVVLDGTGRVYLSAAPQCPFPDTMLDSALATGVFDYVWIQFYNNLPCEYTQNNFDNLIKTWNQWSTSLNAGKIFLGLPADQSAAGSGYVPTDVLISKILPAINKSPNYGGIMLWSRYEDKMSGYSSYIQNFQINQTANSLCTQQSLPACSSSKDGFVESVGNMSSTGIQVYAGDNGTQCCEIICRNNCSCQAYAPINRKNNTGCQIWLKGTKFVSGSVDIALPIYVSVALLPEVKGTSRFPTTTSGRWYIWLIVGVAAAFAIPVIFYLWRALWRNYKAKVERKKMQKKLLHDIGGNSIKSKKKGKTSNGVEVFTFETIAAATENFSEANKLGEGGFGPVYKGTLRDQQEVAIKRLSKTSGQGLMEFKNEAKLMAKLQHTHLVKLLGFCIERDERILVYEYMPNKSLDFYLFDSARKNLLDYETRLNIIGGIAQGLLYLHKYSRLKVIHRDLKAGNILLDHEMNPKISDFGMARIFGVRASEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLEILSGKKNNSRYDSDRPLNLIGYAWQLWNEGRAMELIDTDWHDLCSQSAVLRCIHIGLLCVQDQATDRPTMADIVSFLSNDTIQLPQPKQPAFFINVVVQDSELPYSRQELHSCNDLTVSSTHGR*	779

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu5g00151	778	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	269	756	-	-
	Lapu5g00151	778	Pfam	Glycosyl hydrolases family 18	23	124	IPR001223	GO:0005975
	Lapu5g00151	778	Gene3D	Phosphorylase Kinase; domain 1	433	535	-	-
	Lapu5g00151	778	Pfam	Protein tyrosine and serine/threonine kinase	463	731	IPR001245	GO:0004672\|GO:0006468
	Lapu5g00151	778	Pfam	Domain of unknown function (DUF3403)	733	778	IPR021820	GO:0004674
	Lapu5g00151	778	SUPERFAMILY	Protein kinase-like (PK-like)	443	757	IPR011009	-
	Lapu5g00151	778	CDD	GH18_hevamine_XipI_class_III	23	265	IPR045321	-
	Lapu5g00151	778	SUPERFAMILY	(Trans)glycosidases	18	264	IPR017853	-
	Lapu5g00151	778	ProSiteProfiles	Glycosyl hydrolases family 18 (GH18) domain profile.	21	279	IPR001223	GO:0005975
	Lapu5g00151	778	CDD	STKc_IRAK	466	731	-	-
	Lapu5g00151	778	ProSiteProfiles	Protein kinase domain profile.	460	736	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu5g00151	778	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	581	593	IPR008271	GO:0004672\|GO:0006468
	Lapu5g00151	778	Gene3D	Glycosidases	143	267	-	-
	Lapu5g00151	778	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	427	535	-	-
	Lapu5g00151	778	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	536	739	-	-
	Lapu5g00151	778	Gene3D	Transferase(Phosphotransferase) domain 1	536	742	-	-
	Lapu5g00151	778	Pfam	PAN-like domain	284	344	IPR003609	-
	Lapu5g00151	778	SMART	serkin_6	460	731	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu5g00151	778	Gene3D	Glycosidases	22	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu5g00151	Lapu-Chr5	1252030	1255503	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu5g00151	450	746	Receptor kinase-like Gene Family	AT4G23230	60.606	2.16e-125	387

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lapu5g00151		PK_Tyr_Ser-Thr	5.1e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu5g00151	-		-	gmx:100794508	1160.21