Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00150 ATGGACACAGATGGCAATGCAAAACAGATTCTTTGGCAAAGTTATGACCACCCCACTTTCCTCCTATTGCCAGGAATGAAACTGGGATTCAACAAGAGAACAGGGCAGAATTGGACCCTCACATCTTGGACAAGCAAAAGCGCTCCTGCTAAGGGTTCCTTCACTCTTGGAGTGGATCAAAACAACAAACAATTGGCCCTATGGTGGCATGGAAACCTGTACTGGACTAGTGGGTCACTCATTGATGGAAGTTTTCCCAATTTGAACTCAACAGGCAAGTACAAGATCTACTTTTCCTATGTGTCAAACGAAAATGAAACATATTTCAGTTATAATTCCACATCACCCTCGACCTGGAATGACCTTGATTTTGTTGGTTTGGATCCACGAGGCCAACTATATGGCAAAGCCTCTGTCTCTTGCAGCACAGACAATCCTGCACGTGTCAGAGGATGCGTCCCCCAAAGGTTCCCAACCTGCAGGAACCAAAGTGCCTATGTATCCACGCTCAACTTTAAGCATGGTAATATGTCCCAAGAAGGCTACAAGAACGAGGATTTAGACAATATTTCTCTTTATGATTGTGGCGTCACGTGCATGAACAGTTGTTCCTGTTTTGCCTATTCCTTCACGTCCCATGATATCACTGGCTGTGAGATGTGGAATAGAGAGACCAAATTTGTCGTGTCTTCTTCTGGTCGGCAAGTTTACTTCATCAATGAACTCATCACTAGCAATGGCTCTTCTGAAGCCAATAAAAGGAAACTATGGATAGGGAGTGTGATTGGTGGAGCTCTACTAATACTTGTATCATCCTTTGTGTTCTATGTATTGTGGAGGAAACGCAGAAGAGCGGAAGAAAGATTGAAGCAAAAGAAGATATTATTTGAGATTGAAGGAACAACAACGCCTTCTTCCCTTGCAAACAGCAGATGCTCAAAAGTTAATAAAATTGAAACCACAAATCATGGGATGCATGTGTTCAGCTTTGAAAGCATCGAATTAGCAACCGATAATTTCTCTTCTGCGAACAAGTTGGGTGAAGGTGGCTTTGGACCTGTCTACAAGGGAAAATTGCTTGATGGTCGAGAAATAGCAATAAAGAGACTCTCTAGAAGCTCAACACAAGGGTTAGCCGAGTTTAAGAATGAGGTTAAATTAATTGCTAAATTCAACCACACTAACTTGGTCAAGCTCTACGGTTTCTGCATTGAAAAAGAAGAAAGGATGTTGATCTACGAATATATGCCCAACAAAAGTTTGGACTGTTACCTTTTTGATCCCAATAATACTTTGTTGGATTGGAAGAGAAGATTTTCCATCGTTCAAGGAGTAGCACAAGGACTTGTCTATCTTCATACATATTCAAGACTAACAGTAATTCATAGAGATTTAAAGCCAAGTAACATTTTACTGGACTGCGAATTGAATCCGAAGATATCTGATTTTGGTTTGGCGAGGATATTTGAGTTGAATGAACCAAAAAAGAACACAAACAAGGTTGTTGGAACTTATGGTTACATGTCTCCTGAGTATGCTTTAAATGGCATTGTTTCGACAAAACTTGATGTTTTTAGTTTCGGAGTATCGATGCTTGAGATTATCAGTGGTAAGAAGAATTCTAGTATTTTTTATTCGGACCATCCGATCAGTCTCATAGGACATGCTTGGCAGATGTGGAATAAGGGTGAAGCTTTAGAATTATTAGACCCTATATTGAAGGGATCATATGTTGTTAATGAAGTGTTAAAATGCATTCATGTCAGCCTTTTGTGTGTACAAGATCAAGCGGATGATAGACCAACTATGTCAGATGTGGTATCTTTCCTATCTAGCGAGTCTATTCTGCTAGCTGAACCGAAGCAACCAACATTCTTCTCTAATACTGGAGTGAATGAGCCTAGTAGAAGTCCTACTGCTGGTGGAAGACATGATTCTCTAAATACTGTAACAACTTCGACAATATGTGGTAGATAA 1977 0.4031 MDTDGNAKQILWQSYDHPTFLLLPGMKLGFNKRTGQNWTLTSWTSKSAPAKGSFTLGVDQNNKQLALWWHGNLYWTSGSLIDGSFPNLNSTGKYKIYFSYVSNENETYFSYNSTSPSTWNDLDFVGLDPRGQLYGKASVSCSTDNPARVRGCVPQRFPTCRNQSAYVSTLNFKHGNMSQEGYKNEDLDNISLYDCGVTCMNSCSCFAYSFTSHDITGCEMWNRETKFVVSSSGRQVYFINELITSNGSSEANKRKLWIGSVIGGALLILVSSFVFYVLWRKRRRAEERLKQKKILFEIEGTTTPSSLANSRCSKVNKIETTNHGMHVFSFESIELATDNFSSANKLGEGGFGPVYKGKLLDGREIAIKRLSRSSTQGLAEFKNEVKLIAKFNHTNLVKLYGFCIEKEERMLIYEYMPNKSLDCYLFDPNNTLLDWKRRFSIVQGVAQGLVYLHTYSRLTVIHRDLKPSNILLDCELNPKISDFGLARIFELNEPKKNTNKVVGTYGYMSPEYALNGIVSTKLDVFSFGVSMLEIISGKKNSSIFYSDHPISLIGHAWQMWNKGEALELLDPILKGSYVVNEVLKCIHVSLLCVQDQADDRPTMSDVVSFLSSESILLAEPKQPTFFSNTGVNEPSRSPTAGGRHDSLNTVTTSTICGR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00150 658 Gene3D Transferase(Phosphotransferase) domain 1 416 619 - -
Lapu5g00150 658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 416 618 - -
Lapu5g00150 658 CDD STKc_IRAK 346 610 - -
Lapu5g00150 658 Pfam Protein tyrosine and serine/threonine kinase 343 610 IPR001245 GO:0004672|GO:0006468
Lapu5g00150 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Lapu5g00150 658 SMART serkin_6 340 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00150 658 MobiDBLite consensus disorder prediction 627 648 - -
Lapu5g00150 658 ProSiteProfiles Protein kinase domain profile. 340 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00150 658 SUPERFAMILY Protein kinase-like (PK-like) 316 610 IPR011009 -
Lapu5g00150 658 Gene3D Phosphorylase Kinase; domain 1 301 415 - -
Lapu5g00150 658 Pfam PAN-like domain 188 224 IPR003609 -
Lapu5g00150 658 ProSiteProfiles PAN/Apple domain profile. 160 242 IPR003609 -
Lapu5g00150 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 632 - -
Lapu5g00150 658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 415 - -
Lapu5g00150 658 Pfam D-mannose binding lectin 4 43 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00150 Lapu-Chr5 1248667 1251393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00150 260 642 Receptor kinase-like Gene Family AT4G05200 46.512 5.42e-119 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g00150 PK_Tyr_Ser-Thr 7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00150 - - qsu:112006430 632.484