Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00144 ATGCCAAAGAAGATTCGAGATTACCTCTTCAAAATCAAAAGCCCTCGACCTCAAATCCGATTACCCTCTAAGAATTGGATTCTATCTGGTTGCAAACATCCTAGGACACCTTCCTTTGCCTTGTACAGTGGTAGAAACCAACCTCATCATCATCAACATCATGTTGTTCGTAACAACAAGGACAATTACCACCACCCCAAGGATGATGCAGCCACCTTAGCAGACGTTGACCGTTTCCTCTTTGAGAATTTCAAGTCTCTGTACCTCAAAGACGACGAAGAAACCTTAAACACCAAAAGGGTCTTCGATGGTGACGATCAAAACCATGAGGTGGTGGAAGAAACAACATCGCCACGTGATCTTCGTGGGTCCACCCGGTTCTTCGTGAAGCCAGGGTTCTCTGGGTCACTAGTGGAGGATGCTTTCACAAACACCAATACAACAACCAGTGACGAAGTAGGATCGGTCTCAACTGTCTCAACACTCTACGATGTTTCGTCTTCCAGTTCTTACGAGAAGGAGGGTGCGGATCACGCGCTTCCGGATAATAGCATCGCTCTCTTGTCGCACTCCACCAGCCCTTACGAGGATTTTAGACGTTCCATGCAAGAAATGGTGGACAACCATGAAGGGGTGGTTGATTGGGATTTCATGGAGGAGCTCTTGTTCTGTTACCTTAACCTCAACCACAAAAAATCGCATAAGTTCATTCTCGGTGCCTTCGTGGATCTCATCACCGTCATGCGCCGGAGTAATTCCCAACCGGCTTCCGACAAGCCACGTAGCGTTCGAACCGTTAGGAGTGGTCGGGAGTTAAGGGATGGCATAAAAAACGTAACTTTAGGATTTGGGTCCTCTTAG 861 0.4739 MPKKIRDYLFKIKSPRPQIRLPSKNWILSGCKHPRTPSFALYSGRNQPHHHQHHVVRNNKDNYHHPKDDAATLADVDRFLFENFKSLYLKDDEETLNTKRVFDGDDQNHEVVEETTSPRDLRGSTRFFVKPGFSGSLVEDAFTNTNTTTSDEVGSVSTVSTLYDVSSSSSYEKEGADHALPDNSIALLSHSTSPYEDFRRSMQEMVDNHEGVVDWDFMEELLFCYLNLNHKKSHKFILGAFVDLITVMRRSNSQPASDKPRSVRTVRSGRELRDGIKNVTLGFGSS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00144 286 NCBIfam uncharacterized plant-specific domain TIGR01568 186 247 IPR006458 -
Lapu5g00144 286 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 84 248 IPR038933 GO:0045892
Lapu5g00144 286 Pfam Transcriptional repressor, ovate 191 246 IPR006458 -
Lapu5g00144 286 ProSiteProfiles OVATE domain profile. 187 247 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00144 Lapu-Chr5 1212381 1213637 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu5g00144 Ovate 5.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00144 - - vum:124828607 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00144 5 1212381 1213637 Lapu5g00144 5 1212381 1213637 ECH
Lapu5g00144 5 1212381 1213637 Lapu10g00577 10 7992176 7993143 PCT