Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00138 ATGGGTGTGAACTCTAACAGAGTTGAACACTTCGATAAGCATGAAACCACCCTCAGAATCCAAACCCAGACACCATCATTGGAAATCCATGCAGTGCAATTGCCACCACCACGAACCACACTCCACAAACTCAGACACAGAGTTTCCGAAATCTTCTTCCCCGACGACCCTCTCTACCGTTTCAAGAACCAAACCTCCTTCAAAAAGTTCATCCTCACTCTTCAGTATCTCTTCCCCATTTTTCAGTGGGCCCCAAACTACAACCTCACCCTTCTCCGCTCTGATCTCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGGATCAGTTATGCCAAGCTTGCAAACTTGCCACCTATTATTGGACTGTATTCAAGTTTTGTGCCTCCATTGATATACTCGCTACTTGGAAGTTCTAAACATCTTGGTGTTGGACCTGTTTCGATCGCGTCTTTGGTTATGGGATCAATGTTAAGTGAGAAAATTTCTTACACACAAGACCCTGTTCTGTATCTTGGATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTGTTCCAAGCTTCTCTGGGTATACTAAGGCTAGGGTTCGTAATTGATTTTCTGTCGAAGGCAACGCTGGTAGGATTCACAGGCGGTGCTGCCATTATTGTGTCACTGCAGCAGCTGAAAGGTTTACTTGGAATAGTGCACTTTACCAGCAAGATGCAAATAGTCCCCGTCATGATCTCTGTTTTCAACCAAAGACACGAGTGGTCATGGCAAACCATTCTTTTGGGATTTGGCTTTCTGGCATTCCTCATGACAACAAGGCACATTAGCTTGAGGAAACCAAAACTCTTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTAGTCTTTCTTCTGAGAAATAAGACTCATCAAATTTCAATTATTGGACACTTACCAAAGGGAGTTAATCCACCTTCATCAAACATGTTATACTTCCATGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATTATCACTGGGATCTTATCTCTAACTGAAGGAATTGCAGTAGGTAGAACATTTGCATCACTTAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCTATTGGTCTAATGAACATAGTTGGCTCTTGTTCGTCATGTTATGTTACAACTGGTAGATCCTTTTCTAGATCAGCTGTTAACTACAATGCCGGAGCACAGACAACAGTTTCAAATATAATCATGGCTGCGGCTGTTCTAGTTACCCTTTCGTTTCTCATGCCTCTATTCTACTATACACCAAATGTTGTCTTAGCAGCCATTATCATCACTGCTGTGATTGGGCTGTTAGATTATCAATCTGCGTATAAATTGTGGAAGGTTGACAAACTTGATTTCTTGGCATGTCTGTGCTCCTTTTTTGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTTGGTATAGCGGTTGTCATATCAGTCATCAAGATCCTGCTTCATGTCACTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACTCAAATATTCCACAATATAAACCAATACAAAGAAGCTTCAAGAGTTCCTTCATTCCTCATTTTGGCTATTGAGTCTCCAATCTATTTCGCTAACTCAACTTATCTTCAAGAAAGGATACTGAGGTGGGTTCGAGAAGAGGAAGAACATATAAAAGCTAATGATGGAGCTTTATTGAGGTGCATGATTTTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGGCTTGAGACTTTATGTGAACTTAGAAAGACGCTGGAGAAGAGATCACTTCAGCTTGTGTTGGCAAATCCCGTTGGAAATGTGGTGGAAAAATTGAACAAGTCAAAAATTTTGGATTCCTTTGGATTAAAAGGAGTCTATCTCACAGTGGGAGAAGCCGTGGCTGACATTTCATCGATCTGGAAAGCTCAGCCTTGA 1968 0.4248 MGVNSNRVEHFDKHETTLRIQTQTPSLEIHAVQLPPPRTTLHKLRHRVSEIFFPDDPLYRFKNQTSFKKFILTLQYLFPIFQWAPNYNLTLLRSDLISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSEKISYTQDPVLYLGLAFTATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAIIVSLQQLKGLLGIVHFTSKMQIVPVMISVFNQRHEWSWQTILLGFGFLAFLMTTRHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNKTHQISIIGHLPKGVNPPSSNMLYFHGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNIVGSCSSCYVTTGRSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLSFLMPLFYYTPNVVLAAIIITAVIGLLDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVVISVIKILLHVTRPNTLVLGNIPGTQIFHNINQYKEASRVPSFLILAIESPIYFANSTYLQERILRWVREEEEHIKANDGALLRCMILDMTAVTAIDTSGLETLCELRKTLEKRSLQLVLANPVGNVVEKLNKSKILDSFGLKGVYLTVGEAVADISSIWKAQP* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00138 655 PANTHER SULFATE TRANSPORTER 41 646 IPR001902 GO:0016020|GO:0055085
Lapu5g00138 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Lapu5g00138 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Lapu5g00138 655 FunFam Sulfate transporter 31 504 650 - -
Lapu5g00138 655 NCBIfam sulfate permease 79 643 IPR001902 GO:0016020|GO:0055085
Lapu5g00138 655 SUPERFAMILY SpoIIaa-like 529 645 IPR036513 -
Lapu5g00138 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Lapu5g00138 655 Pfam STAS domain 525 643 IPR002645 -
Lapu5g00138 655 Pfam Sulfate permease family 92 472 IPR011547 GO:0016020
Lapu5g00138 655 Gene3D STAS domain 504 649 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00138 Lapu-Chr5 1168031 1172889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00138 1 655 Inorganic Solute Cotransporters AT3G15990 76.104 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00138 K17471 - gmx:100812617 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00138 5 1168031 1172889 Lapu5g00138 5 1168031 1172889 ECH
Lapu5g00138 5 1168031 1172889 Lapu10g00580 10 8010157 8014697 PCT