Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00113 ATGCCTTCAAGACCCTTCCCTCTCGCAAGTCCCACCAAAACCAAGGCCCTCTTCCTAGCACTCACCATTTCAGCTTGTGTTGTGATTTTCTGCTCAATCCTCTACTTCCTCTACCATCTGTGGCTTTCTCTAGTTCATAGAGCTAAGACCATCCCCTTTGATGCAAGTGCTCCCTTGAAGCTCCAAAGATTCTCATACAAAGATTTAAAGCAAGCCACCAATGGCTTTGACACGGCCAATGTAATTGGCAAAGGCGGCTCTGGCACTGTTTTCAGAGGCGTACTTAAAGACGGCAAGTTGATTGCCATCAAGCGCCTGGACGCATTATCTTTGCAGTCAGAGAGAGAGTTTCAAAACGAGCTGCAGATTCTTGGAGGGTTAAGGTCACCATTCTTGGTGACCCTTTTGGGTTATTGTGTGGAAAAGAACAAAAGAGTGCTGGTGTATGAGTATATGCCCAACAGAAGCTTGCAGGAGTCCCTCTTTGGAGATGGGGGTTTGAGTTTGAGTTGGGAGAGCAGGTTTTGCATAATATTGGATGTTGCTAGAGCTATGGAGTTCTTGCACCTTGGATGTGATCCTCCAGTGATCCACGGTGATATCAAGCCAAGCAATGTTTTGCTTGATGCAGAGTGGCGTGGGAAGATCTCTGACTTTGGCTTGTCAAGGATTAAGGTGGAGGGTGAGTTTGGTGTTGACTTGTTTAGCCAGGACCTAGGGAGGAGCCAGGATCTATGGAAAAGCCAAGAGCTTTCAGGTAATTTGACTAATTTGACTGCAGAAACTCCTGCTATTGGCACTCCAGTTGAGAGTGTTAGTGAAGTAGATTTTGCACTAGCTTTGCAAGCCTCTTCTTCATCTAAAAATAGTAGGACTTGCTTTAACGTTAAAACTTTGAATTTGAATTCTCTGAATTATAATGCCAATATAGCCAGTGAAAGTGAAATCAGGAGTGTGAATGCAAAGGGTAAGGAAATTTCAGCTTTGGATAGAGATGATTGGAATGTTAAGTTTTTTCCTTACGATGATGAGCTTTCTAGCATTGATTACAGTAAGGAGTTAACAGTGAATGCTTCTTTCGTGGATGATGAGAAGGCAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAGTGGAGAGTTATGTAGTAAAGACTATGTTATGGAGTGGATAGGGAGTCAGATTTGTCCATCAAACCCTGATTGGGATCATGGTAAGAACAATGTTAACGAGAAAGTAGAGTTGGAAAATTCAAGTCCAAAGGATAAAGACCATGATGCAATTGCACCCCAATCACAGGTGTTTGGGATAGGACACGATACTACAGATAATGGGGTTGAGAAGAAAGAGTCAAGGGGAAAGAAAAATCACAAAAAGAAACATAGGAAGATGCAAGAGTGGTGGAGAGAAGAGCATCTCGCTGAATTAAGCAAGAAGACCAATAAACTTAAAAATCTTCACACTAAATGGAAGAAAGGCATGAAAGTGCCCCATTTTGATTTGGGTAGAAGGTTTTATCTTTGCAGACGTAAGAAGTATGGAATGGAGGATGAAGATGAATGTGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGATGGAAGAAGAAAAGTACTCGTTCCATTGGTAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTCAGCAGCACAACCAGCATGAGAGGGACACTCTGTTATGTGGCACCAGAATATGGAGGGTGTGGATTCTTGATGGAGAAAGCTGATATTTATAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCAGGTAGGAGACCATTACATGTTCTTGCATCACCCATGAAGCTAGAGAAAGCTAACCTAATAAGCTGGTGTAGACACTTGGCTCAAGCTGGTAACATTTTAGAACTAGTGGATGAGAGATTGAAAGAAAATTTCAACAAGGACCAAGCAAGCCTGTGTATCAATTTGGCACTCACTTGCTTACAAAAAATTCCCGAGTTGAGGCTGGATATTGGGGATATTGTTAAGATTTTGAAGGGGGAGATGGATCTTCCACCACTTCCATTTGAGCTCTCCCCTTCTCCTCCTTCCAAATTTTACGGCAAATCGAGGAGAAAACAGAAGAGCAGTGCAGAGTAG 2136 0.4284 MPSRPFPLASPTKTKALFLALTISACVVIFCSILYFLYHLWLSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDTANVIGKGGSGTVFRGVLKDGKLIAIKRLDALSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYMPNRSLQESLFGDGGLSLSWESRFCIILDVARAMEFLHLGCDPPVIHGDIKPSNVLLDAEWRGKISDFGLSRIKVEGEFGVDLFSQDLGRSQDLWKSQELSGNLTNLTAETPAIGTPVESVSEVDFALALQASSSSKNSRTCFNVKTLNLNSLNYNANIASESEIRSVNAKGKEISALDRDDWNVKFFPYDDELSSIDYSKELTVNASFVDDEKANGKQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNPDWDHGKNNVNEKVELENSSPKDKDHDAIAPQSQVFGIGHDTTDNGVEKKESRGKKNHKKKHRKMQEWWREEHLAELSKKTNKLKNLHTKWKKGMKVPHFDLGRRFYLCRRKKYGMEDEDECDQNGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKENFNKDQASLCINLALTCLQKIPELRLDIGDIVKILKGEMDLPPLPFELSPSPPSKFYGKSRRKQKSSAE* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00113 711 SUPERFAMILY Protein kinase-like (PK-like) 56 696 IPR011009 -
Lapu5g00113 711 Gene3D Phosphorylase Kinase; domain 1 45 151 - -
Lapu5g00113 711 MobiDBLite consensus disorder prediction 687 711 - -
Lapu5g00113 711 FunFam Receptor-like serine/threonine-protein kinase At4g25390 45 151 - -
Lapu5g00113 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Lapu5g00113 711 PANTHER OS07G0586332 PROTEIN 12 706 IPR044576 -
Lapu5g00113 711 Coils Coil 473 493 - -
Lapu5g00113 711 Pfam Protein kinase domain 78 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00113 711 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lapu5g00113 711 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Lapu5g00113 711 SMART serkin_6 76 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00113 711 FunFam Receptor-like serine/threonine-protein kinase At4g25390 534 683 - -
Lapu5g00113 711 ProSiteProfiles Protein kinase domain profile. 76 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00113 711 FunFam putative receptor-like protein kinase At1g80870 152 263 - -
Lapu5g00113 711 Gene3D Transferase(Phosphotransferase) domain 1 152 263 - -
Lapu5g00113 711 Gene3D Transferase(Phosphotransferase) domain 1 537 683 - -
Lapu5g00113 711 MobiDBLite consensus disorder prediction 439 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00113 Lapu-Chr5 925267 928435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00113 545 677 Receptor kinase-like Gene Family AT3G58690 29.851 1.26e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lapu5g00113 Pkinase 2.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00113 - - gmx:100807432 1305.81