Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00110 ATGCTGATCAACGTGAAGCAATCCACAATGGTGCGGCCTGCGGAGGAGACGCCGCGGAGGGCGCTGTGGAATTCCAACGTGGATTTGGTTGTGCCAAATTTCCACACACCCAGCGTCTATTTCTATAGGCCAAATGGGGCCTCCAATTTCTTCGACACCACCGTCATGAAGGCTGCTCTCAGTAAGGCTCTCGTCCCTTTCTATCCAATGGCTGCCCGACTCCGTCGTGATGAGGACGGTCGTGTGGAGCTTTTCTGCGATGGTCAGGGAGTGCTTTTTGTCGAGGCTGAAACCACCATCTCCATTGATGATTTTGGTGACTTCTCACCTACTCTTGAACTCCGGCAGCTCATCCCCGCCGTGGACTATTCTGCAGGGATCGAAACTTATCCACTCTTAGTACTACAGGTAACATATTTCAAATGTGGAGGAGTGTCATTAGGTGTTGGTATGCAACACCATGCAGCAGATGGAGCATCGGGTCTTCACTTCATCAATGCATGGTCAGATGTTGCTCGCGGCTTGGATATTTCCCTCCCTCCATTCATCGACAGGACACTGCTCCGTGCCCGGGATCCACCTCGTCCTGTTTTTGATCACATTGAATACAGGCCTCCACCAGCCATGAAGACTACCCTGCAACCCCAAAAACCAGGCTGTGACGATGCCATTGCAGTCTCTACTTTCAAACTGACCCGTGACCAACTGAACACCCTTAAGGGTAAGTCCAGAGAAGATGGCAACACAATCAGCTATAGCTCTTATGAGATGTTGGCTGGTCATGTATGGAGAAGTGTGTGCAAGGCAAGAGCACTACCTGATGACCAAGAAACCAAATTGTATATTGCAACTGATGGAAGGTCAAGGCTGCAACCTCCCCTCCCTCCTGGTTACTTTGGCAATGTCATCTTCACCACCACTCCTATAGCAGTGGCCGGCGATCTCATGGCAAAACCAACATGGTATGCTGCAAGCCGAATTCATGATGCATTAATGCGAATGGACAACGAATATTTGAGCTCAGCCCTTGACTATCTAGAGCTCCAGCCTGATCTAAAAGCTCTAGTTCGTGGATCACATACTTTTAGGTGTCCAAACCTTGGCATCACTAGCTGGGTAAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGACCCATTTTCATGGGACCTGGTGGAATTGCATACGAGGGGCTATCTTTCATTATTCCTAGCTCAACAAATGATGGCAGCATGTCTGTGGCAATCGCTCTGCCTCCAGAGCGAATGAAAGTGTTTCAGGATTTGTTTTATGACTTTTGA 1305 0.492 MLINVKQSTMVRPAEETPRRALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDTTVMKAALSKALVPFYPMAARLRRDEDGRVELFCDGQGVLFVEAETTISIDDFGDFSPTLELRQLIPAVDYSAGIETYPLLVLQVTYFKCGGVSLGVGMQHHAADGASGLHFINAWSDVARGLDISLPPFIDRTLLRARDPPRPVFDHIEYRPPPAMKTTLQPQKPGCDDAIAVSTFKLTRDQLNTLKGKSREDGNTISYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAVAGDLMAKPTWYAASRIHDALMRMDNEYLSSALDYLELQPDLKALVRGSHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSMSVAIALPPERMKVFQDLFYDF* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00110 434 Gene3D - 1 205 IPR023213 -
Lapu5g00110 434 Pfam Transferase family 3 432 - -
Lapu5g00110 434 Gene3D - 220 434 IPR023213 -
Lapu5g00110 434 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Lapu5g00110 434 FunFam Tryptamine hydroxycinnamoyl transferase 210 432 - -
Lapu5g00110 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00110 Lapu-Chr5 900262 904368 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00110 1 433 Monolignol Biosynthesis Gene Families AT5G48930 76.212 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00110 K13065 - gmx:100801923 806.594