Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00108 ATGACGATTAGAGTGAAGGAGTCGACAATGGTGCAACCGGCAGAGGGGACACCGCGTAAGGTGTTGCGGAACTCAGACCTAGATTTGCTGGTGGGGAATTATCACACTCCCAGCGTCTATTTCTACAATCCAAACGGGGCTTCCCAATTTTTCGATGCCAACATTCTGAAAGAAGCTCTCAGTAAGACTGTCGTCCTTTTCTACCCAATGGCCGCCCGCCTCCGCCACGGTGAGGACCACCGCGTGGAGATTCATTGTGAGGGTCAGGGTGTACTTTTCGTTGAGGCTGATGCCACCGTTGCCATGGACCACTTCACTCACAACCTTCACCATCGCAACCTTATTCCCGCCGTGGATTATTCTGCGGGAATCGAAACATATCCGCTAGTTGTGTTACAGGTAACATATTTCAAATGTGGAGGGGTCTCATTAGGCGTTGGTATCGAGCACCATGTAGCAGATGGAGTGTCTGGTGTTCATTTTATCAATGCATGGTCAGAAGTGGCTCGTGGCTTCCACATTTCTTCCAGAGAAGATGGCAACACAATCAACTATACCACTTATGAGATGTTTGCAGGTCATGTATGGAGAAGTGCGTGCAAAGCAAGAGCCCTTCCCGATGACCAAGAAACAAGACTGTATATTCCAATTGATGGAAGGTCAAGGCTGCAACCTCCCCTCCCCCCTGGTTACTTAGGCAATGTCATCTTCTCCACCTTTCCTACAGCAGTGGCTGGAGATCTCATGTCAAAACCTGCATGCTATGCTGCAAACAAAATCCGCTGCGCAATAATGCGAATGGACAACGAATATTTGAGGTCTGCTCTTGACTATCTAGGGTTAAAGCCTGATCTAGAGGCTCTTGTTCGTGGAGCACATACTTTTGGGTATCCAAATATGGGTATCAATAGCTGGGCAAAGTTTCCAATCTATGATGCTAACTTTGGTTGGGGAAGACCAGTCTTCATGAGACCTGGCTGGATTATACACGAGGGGCTATGCATCATAATTCCAAGCTCAACAAATGATGGCAGCTTATATCTGGCAATCGCTCTACCACCTCACCATATCAAGCTCTTTCAAGAATTGTTTTATGACATTTGA 1104 0.4728 MTIRVKESTMVQPAEGTPRKVLRNSDLDLLVGNYHTPSVYFYNPNGASQFFDANILKEALSKTVVLFYPMAARLRHGEDHRVEIHCEGQGVLFVEADATVAMDHFTHNLHHRNLIPAVDYSAGIETYPLVVLQVTYFKCGGVSLGVGIEHHVADGVSGVHFINAWSEVARGFHISSREDGNTINYTTYEMFAGHVWRSACKARALPDDQETRLYIPIDGRSRLQPPLPPGYLGNVIFSTFPTAVAGDLMSKPACYAANKIRCAIMRMDNEYLRSALDYLGLKPDLEALVRGAHTFGYPNMGINSWAKFPIYDANFGWGRPVFMRPGWIIHEGLCIIIPSSTNDGSLYLAIALPPHHIKLFQELFYDI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00108 367 Gene3D - 164 367 IPR023213 -
Lapu5g00108 367 Pfam Transferase family 2 172 - -
Lapu5g00108 367 Pfam Transferase family 179 365 - -
Lapu5g00108 367 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 364 - -
Lapu5g00108 367 FunFam Tryptamine hydroxycinnamoyl transferase 165 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00108 Lapu-Chr5 895507 896878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00108 175 367 Monolignol Biosynthesis Gene Families AT5G48930 64.767 1.29e-89 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00108 K13065 - ming:122075440 335.88