Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00107 ATGGTTTTCTTCCAAACCTTGTTCTTCCTTTTACTTTTAACATTTGGTCACTCCTTTCCACGGCGCCACCACCCCCACCCTTCTCATTCTTTACTCACCGATGGCGCTGCACTTCTGGAATTCAGAAAAACAATCGTATCAGACCCGCGTTCCTCACTTGCAAACTGGGATGAAGCTGTTCCTGTGTGCAACTTCACGGGTGTTGAATGTGACAGATCCCATAACCGTGTTATACGACTAATCCTATATGATAAAGGTCTTGTGGGACTGCTCTCACCCGTTCTTTCCAATCTCACTGGACTGCACAACCTTGAGATAGTTCGCAGTCACTTATTTGGCATTATTCCACCTGAATTTTCCAACCTCAGACGCATTCACTGCATCATTCTTGACGGGAATAATTTGCATGGCTCCGTACCAGACTCCTTTTCCATGCTTTCTAAGCTTAACATTCTAGTCATCAAGGAAAGTAACATATCAGGTTTGGTTCCTCCATCTCTGTTTTCCAACTGCACTCTGCTAAATGTTGTGGACTTCTCCAGCAACTCATTAACTGGTCAAATCTCGGAAGAGATTGGAAACTGCCAAAGCCTGTGGAGTATCAGTTTATACAATAATCAATTTACTGGGCAGCTTCCTCTCTCGCTGACCAATCTATCGCTTCAAAATTTAGATGTGGAGTACAATTATCTTTCTGGTGTATTGCCTGCTGAGTTTGTAAGCAGCTGGCCGTATCTCCTTTACCTTCATTTATCATACAACAATATGGTAAGCCATGATAGCAACACCAATCTTGATCCATTTTTCACTGCCCTCAGAAATAACAGTAATCTAGAGGAGCTTGAATTGGCAGGAATGGGCCTTGGGGGAAGGTTCACCGATACTCTCCCCTCCCAACTCACCAACCTAAGAACCCTGCTACTGCAGGAAAACCAAATTTTTGGATCAATTCCTCCCAGCTTAGCAAGCCTTTCAAGGCTTTTCGTTCTGAATTTAACATCCAATCTTCTAAATGGAACTATATCCTCAGATATATTCAGATTACCAAGGTTGGAACAACTTTTCTTATCACACAACCATTTCAAAATTCCAATTCCAGAAGCAATAGGCAAGTGTCTTAATCTGGGCCTATTGGATCTGTCACACAACCAATTCTCAGGTAGGATTCCAGACAGTTTGGGAAATTTGGTTAGACTAAATTCTTTGTTTCTCAACAATAATCTTCTCTCAGGAACAATACCTCCCACATTGGGACGGTGCACTAATCTGTACAGGCTTGACTTGTCCCGTAATAGATTAACAGGAAGCATCCCACTGAAACTGGCAGGCTTGCATGAGATCAGAATTTTCATAAATGTCTCTCATAACCACCTTGAAGGTGACCTGCCAATTGAGCTCAGCAAATTAGAAAAGGTTCAGGAGATAGATTTTTCGTCCAATTACCTGACTGGAAGTATCTTCCCTCAGATAGCAGGATGCATTGCTGTTTCAATGATTAATTTTTCAAACAACTTTCTTCAAGGTGAGCTCCCTCAGTCCCTGGGTGATCTGAAGAACCTTGAATCTTTTGATGTTTCACGAAATCAATTATCTGGACTGATACCAGCAAAACTTGGAAATCCAAAACTTTGTGGGACAATTGCAGGAATATCCGTGTGCTCTCAAAGTAGAAGAAGAATTCATGCTCGTCTGCTATTGATTATATTAATTTTGGTGATCTTCATATCAAGCTTGTTGTCAATAATATGCTGCGTAATTGGATGCAAGCGTCTTAAAGTAATCATCCGCTCTCAGAGGACCGAGGCAAGCAAAAATGCAGCTGGAACAGAGTTGATTAGTAACTTCCCAAGAATCACGTATAAGGAACTGTCAGATGCCACTGGAGGATTTGACAGTCAGAGACTTGTTGGATCAGGTAGTTATGGACTTGTCTATAGAGGTGTTCTCATGGACGGGACACCTATCGCAGTCAAGGTGCTGCATTTGCAATCTGGAAATTCTACCAAGAGCTTCAACAGAGAATGCCAAGTTTTGAAGAGAATTAGACACAGGAATCTTATAAGGATTATGACAGCATGTAGCCTACCCGATTTTAAGGCTCTTGTTCTACCTTATATGGCCAATGGCAGCTTGGAGAGCCGCCTCTATCCTTCTTCTGGATCATCAGACTTGAGTATTGTCCAGCGGGTAAATATTTGCAGTGATATAGCTGAAGGGATGGCCTATTTGCATCATCATTCTCCTGTCAGAGTCATACACTGTGATCTAAAACCGAGCAATTGTCTTCTCAATGATGACATGACAGCTCTCGTCTCTGATTTTGGGGTTGCAAGGCTAATCATGAGCGCTGGAGGTGGGGCTATTGATAACATGGGCAACTCTAGTGCAAATTTGTTCTTTGGATCTATTGGATACATTGCACCAGAGTATGGATTTGGATCCAATTCATCTATCAAAGGAGATGTCTATAGCTTTGGCATTCTAGTTCTTGAGATGGTGACTAGAAGAAGACCAATAGATGACATGTTTGTGGGTGGGTTAAGTCTGCACAAATGGGTAAAGATTCATTTTCATGGAAGGGTAGAAAAAGTGGTGGATCCTGCTTTGATGACAGCTTCAAGAGATCAATCCCAAGAGGTCAGAAAGATGTGGGAAGCTGCTATTGCAGAGTTAATCGAGTTGGGGCTCCTCTGCACACAGGAGTCTCCTTCGACTAGACCAACCATGCTTGATGCAGCAGATGACTTAGATCGTCTCAAGAGATACCTTAATGGGGACACAGCAGGAACTTTTGCCTCATCTCTAGGAATTTCATCTTCCACTATAGGTGGTGACTGGTGA 2841 0.4249 MVFFQTLFFLLLLTFGHSFPRRHHPHPSHSLLTDGAALLEFRKTIVSDPRSSLANWDEAVPVCNFTGVECDRSHNRVIRLILYDKGLVGLLSPVLSNLTGLHNLEIVRSHLFGIIPPEFSNLRRIHCIILDGNNLHGSVPDSFSMLSKLNILVIKESNISGLVPPSLFSNCTLLNVVDFSSNSLTGQISEEIGNCQSLWSISLYNNQFTGQLPLSLTNLSLQNLDVEYNYLSGVLPAEFVSSWPYLLYLHLSYNNMVSHDSNTNLDPFFTALRNNSNLEELELAGMGLGGRFTDTLPSQLTNLRTLLLQENQIFGSIPPSLASLSRLFVLNLTSNLLNGTISSDIFRLPRLEQLFLSHNHFKIPIPEAIGKCLNLGLLDLSHNQFSGRIPDSLGNLVRLNSLFLNNNLLSGTIPPTLGRCTNLYRLDLSRNRLTGSIPLKLAGLHEIRIFINVSHNHLEGDLPIELSKLEKVQEIDFSSNYLTGSIFPQIAGCIAVSMINFSNNFLQGELPQSLGDLKNLESFDVSRNQLSGLIPAKLGNPKLCGTIAGISVCSQSRRRIHARLLLIILILVIFISSLLSIICCVIGCKRLKVIIRSQRTEASKNAAGTELISNFPRITYKELSDATGGFDSQRLVGSGSYGLVYRGVLMDGTPIAVKVLHLQSGNSTKSFNRECQVLKRIRHRNLIRIMTACSLPDFKALVLPYMANGSLESRLYPSSGSSDLSIVQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNCLLNDDMTALVSDFGVARLIMSAGGGAIDNMGNSSANLFFGSIGYIAPEYGFGSNSSIKGDVYSFGILVLEMVTRRRPIDDMFVGGLSLHKWVKIHFHGRVEKVVDPALMTASRDQSQEVRKMWEAAIAELIELGLLCTQESPSTRPTMLDAADDLDRLKRYLNGDTAGTFASSLGISSSTIGGDW* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00107 946 Gene3D Ribonuclease Inhibitor 148 220 IPR032675 -
Lapu5g00107 946 Gene3D Ribonuclease Inhibitor 34 147 IPR032675 -
Lapu5g00107 946 Pfam Protein kinase domain 632 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00107 946 SUPERFAMILY L domain-like 324 540 - -
Lapu5g00107 946 CDD STKc_IRAK 636 919 - -
Lapu5g00107 946 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Lapu5g00107 946 SUPERFAMILY L domain-like 60 361 - -
Lapu5g00107 946 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 168 917 - -
Lapu5g00107 946 FunFam Nuclear pore complex protein NUP107 32 190 - -
Lapu5g00107 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Lapu5g00107 946 ProSiteProfiles Protein kinase domain profile. 630 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00107 946 Gene3D Transferase(Phosphotransferase) domain 1 706 929 - -
Lapu5g00107 946 Pfam Leucine rich repeat 301 361 IPR001611 GO:0005515
Lapu5g00107 946 Gene3D Phosphorylase Kinase; domain 1 611 705 - -
Lapu5g00107 946 Gene3D Ribonuclease Inhibitor 221 555 IPR032675 -
Lapu5g00107 946 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Lapu5g00107 946 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 260 465 - -
Lapu5g00107 946 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 706 928 - -
Lapu5g00107 946 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 610 705 - -
Lapu5g00107 946 SMART LRR_typ_2 396 420 IPR003591 -
Lapu5g00107 946 SMART LRR_typ_2 300 324 IPR003591 -
Lapu5g00107 946 SMART LRR_typ_2 517 541 IPR003591 -
Lapu5g00107 946 SMART LRR_typ_2 348 372 IPR003591 -
Lapu5g00107 946 SMART serkin_6 630 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00107 946 SUPERFAMILY Protein kinase-like (PK-like) 610 916 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00107 Lapu-Chr5 889266 892615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00107 33 906 Receptor kinase-like Gene Family AT3G47570 33.333 1.65e-150 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu5g00107 Pkinase 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00107 - - pvu:PHAVU_005G183300g 1631.69