Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00097 ATGGGGTGTAGAGAAGTCAACGTGGTTTCTACCGAACCGTGTATATATATATACATCCACAGAGAAAGGAAGGAGCAATATTGCATGCATGGTCTGATGATGGAGTCAACAAAAAGTGCAGTGTTGCTGATATTTGTTTCAGTTTCATTGTGGCGGCTACAGGGTGGTAGCGGTAGTATTATCGTATCCAAGGATGGGAGTGGAGATTACACAACGGTGGGTGAAGCCATTAAGAAGGCTCCGGACATGAGTGAGAAACCCTATACCATTCATGTTCGAGCAGGCACTTATGAAGAGTACCTCTTCATTCCTCCTCATAAGACTAATATTAGGCTCCTTGGAGATGGACCTCACCACACCAAAATAGTAGGCTACCAAAATGGTTCCACCATAGACATCCGGGGAGATGGGTTCGTGGCAGAGAAGATGGGATTTGCGAACTGGGCAGGGCTAAACGCAAGCAGTGCAGTGGCGGTTCGGAACGAGGCAGACAAGAGCATATTCTTCCAGTGCTCCATCGAAGGACTCCAGGACACACTGTGGGCGGTTTCGGGGCGTCAGTTCTACAAAAGGTGCGCGATCTACGGCACAGTTGACTTCATCTACGGCAACGCGGCGGCGGTGTTCCAGGACTGCATGGTGTACGCGCGGTACAGAGAGTACGTGACCTTCACAGCTCAGTCGCGAGAGGATCCGAACGAGAAGAGTGGGTTCAGTTTCCAGAGATGCAAATTCAGAATGTCCCCTGAGGATGAGAGCAGAAAGAGAGAGGTGCATGCGAGCTTGGGCCGTCCCCTCAGACCCTATTCCACTGTGGCCATCCTCCACTCCTACATCGACTCCATCGTGGATCCTAAAGGCTGGGAGCCCATGCCCCATCAGCCCACTGACAAACTCACCTACATTGAGTTTCAGAATTTTGGGCCCGGCTCTGATACCCATGCCAGAGTTAAGTGGGCCGGTGTTACCGTCCTTAGCCACCCGGCCCAAGCAGCCCCTTTCACTGCCTCCTTTCTCTTAGACGCCGACTCTTGGATTCCCGACACCGGAGTTCCCTACGACACTGGACTCTAG 1074 0.5205 MGCREVNVVSTEPCIYIYIHRERKEQYCMHGLMMESTKSAVLLIFVSVSLWRLQGGSGSIIVSKDGSGDYTTVGEAIKKAPDMSEKPYTIHVRAGTYEEYLFIPPHKTNIRLLGDGPHHTKIVGYQNGSTIDIRGDGFVAEKMGFANWAGLNASSAVAVRNEADKSIFFQCSIEGLQDTLWAVSGRQFYKRCAIYGTVDFIYGNAAAVFQDCMVYARYREYVTFTAQSREDPNEKSGFSFQRCKFRMSPEDESRKREVHASLGRPLRPYSTVAILHSYIDSIVDPKGWEPMPHQPTDKLTYIEFQNFGPGSDTHARVKWAGVTVLSHPAQAAPFTASFLLDADSWIPDTGVPYDTGL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00097 357 FunFam Pectinesterase 58 352 - -
Lapu5g00097 357 Gene3D - 57 357 IPR012334 -
Lapu5g00097 357 PANTHER PECTINESTERASE 58 347 - -
Lapu5g00097 357 Pfam Pectinesterase 60 342 IPR000070 GO:0030599|GO:0042545
Lapu5g00097 357 SUPERFAMILY Pectin lyase-like 58 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00097 Lapu-Chr5 809825 818061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00097 60 357 Carbohydrate Esterase AT4G03930 42.765 3.62e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00097 K01051 - gmx:102665195 503.056