LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu5g00095	ATGGGTTCGGTGGTGGAGGAGAAGATAGAGCGCGATCCCTTCCACAACCCTCACGATGACGATCACACTCCCTTTGCCTCTTCCCCATCCGTCTCCAAGCTCCACCCCTTCAATTTCGAGACCACCGTTGTCGATTTCCGGCCCTCATCCGCCTTCCACATTAGACGTATCAGCAGGAGTATATATTTTGTCTTGATTAAGGCCAAGATCAACATCTTGCTTCCATTTGGTCCATTCGCTATTCTCCTCCATTATCTAACCGGACACCATGGATGGGTCTTCTTCTTCACGTTGTTGGGTATTACTCCCTTGGCCGAACGTCTCGGTTATGCTACCGAACAGCTTGCCTTCTTCACGGGACCAACAGTTGGGGGTCTGCTTAATGCCACATTCGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAAAAGCAATATGATAAGGGTTGTTCAGCAATCTTTACTTGGTTCTATCCTGTCAAATATGCTTCTAGTTCTTGGCTGTGCTTTCTTTACCGGTGGCATTTGCCACTACAAAAAAGTACAGGTTTTTGATAAGGCAGCTGCAGTTGTCAATTCTGGGTTACTCTTGATGGCTGTAATGGGAATCCTGTTTCCTGCTGTGCTTTATTTTACTCACTCAGAAGTTCATGAAGGGAAGTCAGTGTTGTCTCTATCAAGATTTAGCAGCTGCATAATGCTAGTGGCGTATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAGCAAAATGTTTATACTCCAGTTAATGAGGAAGGAGACAATGGTGAAAATTCTGATGAGGAAGAAGAACTTGAATTAACTCAATGGGAGGCGATAGCCTGGCTTGCTATTTTGACAGCATGGGTATCTATATTGTCTGGATACCTTGTAGATGCCATACAGGGTGCATCTGAGTCATTAAATATGTCAGTGGCTTTTATTTCTGTCATCTTGCTTCCAATTGTAGGCAACGCTGCAGAACATGCCAGTGCCATCATGTTTGCGGTGAAGGACAAGCTTGATATTACTATTGGAGTTGCCATTGGATCGTCTACACAGATATCTATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTCCAACTCTTTGAGACTGCCACGCTTTTTATCACCGTGTTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTAATGCTTGTGTTGTGCTATCTGATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGGTGACTAA	1302	0.4339	MGSVVEEKIERDPFHNPHDDDHTPFASSPSVSKLHPFNFETTVVDFRPSSAFHIRRISRSIYFVLIKAKINILLPFGPFAILLHYLTGHHGWVFFFTLLGITPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKSNMIRVVQQSLLGSILSNMLLVLGCAFFTGGICHYKKVQVFDKAAAVVNSGLLLMAVMGILFPAVLYFTHSEVHEGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNVYTPVNEEGDNGENSDEEEELELTQWEAIAWLAILTAWVSILSGYLVDAIQGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLVLCYLIVAASFFVHVDPKSGGD*	434

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu5g00095	433	NCBIfam	calcium/proton exchanger	73	423	IPR004798	GO:0006816\|GO:0015369
	Lapu5g00095	433	Gene3D	-	121	259	IPR044880	-
	Lapu5g00095	433	Gene3D	-	268	424	IPR044880	-
	Lapu5g00095	433	FunFam	Vacuolar cation/proton exchanger	268	424	-	-
	Lapu5g00095	433	PANTHER	VACUOLAR CALCIUM ION TRANSPORTER	53	428	IPR004713	GO:0006812\|GO:0008324\|GO:0016020
	Lapu5g00095	433	FunFam	Vacuolar cation/proton exchanger	121	260	-	-
	Lapu5g00095	433	Pfam	Sodium/calcium exchanger protein	92	247	IPR004837	GO:0016020\|GO:0055085
	Lapu5g00095	433	Pfam	Sodium/calcium exchanger protein	281	420	IPR004837	GO:0016020\|GO:0055085
	Lapu5g00095	433	NCBIfam	calcium/proton exchanger	64	423	-	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu5g00095	Lapu-Chr5	790999	804065	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu5g00095	59	432	Antiporters	AT3G13320	74.667	0.0	575

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu5g00095	K07300		-	gmx:100806000	739.954

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