Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00095 ATGGGTTCGGTGGTGGAGGAGAAGATAGAGCGCGATCCCTTCCACAACCCTCACGATGACGATCACACTCCCTTTGCCTCTTCCCCATCCGTCTCCAAGCTCCACCCCTTCAATTTCGAGACCACCGTTGTCGATTTCCGGCCCTCATCCGCCTTCCACATTAGACGTATCAGCAGGAGTATATATTTTGTCTTGATTAAGGCCAAGATCAACATCTTGCTTCCATTTGGTCCATTCGCTATTCTCCTCCATTATCTAACCGGACACCATGGATGGGTCTTCTTCTTCACGTTGTTGGGTATTACTCCCTTGGCCGAACGTCTCGGTTATGCTACCGAACAGCTTGCCTTCTTCACGGGACCAACAGTTGGGGGTCTGCTTAATGCCACATTCGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAAAAGCAATATGATAAGGGTTGTTCAGCAATCTTTACTTGGTTCTATCCTGTCAAATATGCTTCTAGTTCTTGGCTGTGCTTTCTTTACCGGTGGCATTTGCCACTACAAAAAAGTACAGGTTTTTGATAAGGCAGCTGCAGTTGTCAATTCTGGGTTACTCTTGATGGCTGTAATGGGAATCCTGTTTCCTGCTGTGCTTTATTTTACTCACTCAGAAGTTCATGAAGGGAAGTCAGTGTTGTCTCTATCAAGATTTAGCAGCTGCATAATGCTAGTGGCGTATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAGCAAAATGTTTATACTCCAGTTAATGAGGAAGGAGACAATGGTGAAAATTCTGATGAGGAAGAAGAACTTGAATTAACTCAATGGGAGGCGATAGCCTGGCTTGCTATTTTGACAGCATGGGTATCTATATTGTCTGGATACCTTGTAGATGCCATACAGGGTGCATCTGAGTCATTAAATATGTCAGTGGCTTTTATTTCTGTCATCTTGCTTCCAATTGTAGGCAACGCTGCAGAACATGCCAGTGCCATCATGTTTGCGGTGAAGGACAAGCTTGATATTACTATTGGAGTTGCCATTGGATCGTCTACACAGATATCTATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTCCAACTCTTTGAGACTGCCACGCTTTTTATCACCGTGTTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTAATGCTTGTGTTGTGCTATCTGATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGGTGACTAA 1302 0.4339 MGSVVEEKIERDPFHNPHDDDHTPFASSPSVSKLHPFNFETTVVDFRPSSAFHIRRISRSIYFVLIKAKINILLPFGPFAILLHYLTGHHGWVFFFTLLGITPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKSNMIRVVQQSLLGSILSNMLLVLGCAFFTGGICHYKKVQVFDKAAAVVNSGLLLMAVMGILFPAVLYFTHSEVHEGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNVYTPVNEEGDNGENSDEEEELELTQWEAIAWLAILTAWVSILSGYLVDAIQGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLVLCYLIVAASFFVHVDPKSGGD* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00095 433 NCBIfam calcium/proton exchanger 73 423 IPR004798 GO:0006816|GO:0015369
Lapu5g00095 433 Gene3D - 121 259 IPR044880 -
Lapu5g00095 433 Gene3D - 268 424 IPR044880 -
Lapu5g00095 433 FunFam Vacuolar cation/proton exchanger 268 424 - -
Lapu5g00095 433 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 53 428 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lapu5g00095 433 FunFam Vacuolar cation/proton exchanger 121 260 - -
Lapu5g00095 433 Pfam Sodium/calcium exchanger protein 92 247 IPR004837 GO:0016020|GO:0055085
Lapu5g00095 433 Pfam Sodium/calcium exchanger protein 281 420 IPR004837 GO:0016020|GO:0055085
Lapu5g00095 433 NCBIfam calcium/proton exchanger 64 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00095 Lapu-Chr5 790999 804065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00095 59 432 Antiporters AT3G13320 74.667 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00095 K07300 - gmx:100806000 739.954