Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00093 ATGCATTCCACCATCTTCATGAGGTGGCTTCTTTTCGTGTCTTGGTTTTTTTATGCTGTCTCTGCACTCACCTCCGATGGGGTCACCCTGTTGTCACTCATGAGGCGGTGGACATCGCTGCCTCCTTCCATAAACGCCACCTGGCTTGCCTCTGACTCCACTCCATGCTCCTCTTGGGTAGGAGTTCAATGTGACCATGCTCACCATGTCGTCTACCTTAACCTCACAGGTTATGAGATTTCTGGTCAATTAGGTCCTGAAATTGGAAATATTTCTCGCCTACAATGCTTAGACCTTACAGATAACAACCTTAATGGTCCAATACCTCACTCCTTCAAAAACTTGCACAGACTCCAGTTTCTTAGCCTTGCCTATAATCAACTATCTGGTGAAATTCCACATTCCTTGACTCAAATCCCTCGATTGCATTTGGTTGATCTATCATATAACATTTTAAACGGTTCCATCCCCACCAGTATTGGGAACATGTCTGAGCTCTTGCAGTTGTATCTTCAGAGTAACCAGTTGTCTGGGACAATTCCCTCATCTATTGGGAATTGCAGTAAATTACTAGAATTGGATTTGGATACCAATCAGTTGGAGGGTAATCTGCCTCATAGTCTAAATAATCTCAATCATCTAGCTTATTTTAATGTCGCCTGGAATAGACTTACGGGTACAATTTCTTTGGGTTCCAGTAGTTGTAAAAACTTGGTATTTTTGGATCTCTCATTCAATGACTTTAGTGGTGGCCTTCCCTTAAGCTTGGGGAACTGTAGTGGTTTATCTGAATTTGCAGCCGTGAACTGCAATTTGGTTGGGAACATTCCGCCCTCCTTTGGCCTACTGACCAAGCTTTCTATTCTATACCTTCCACAAAACCATTTATCTGGAAAAATACCTCCAGAAATTGGCAACTGCAAGTCTCTGACAGAGTTACAGCTGTATTCCAATCGACTTGAGGGCAACATTCCTAGTGAATTGGGAAAACTAAGAAAACTAGTCGATTTGGAATTGTTTTCAAATCAGTTGACTGGTGAAATTCCACTCAGCATCTGGAAGATTAAAGGTCTTCAGTATCTGATTCTGTATAATAATAGTCTTTCTGGAGAATTGCCATTGGAGATTACAGAGCTCAGGCAACTGAAAAACATCTCGTTGTTTAACAACAAGTTTTCCGGTGTCATACCTCAAAGCTTGGGAATTAACAGCAGTTTAGTTCTGTTGGACTTCACAAGTAATAAATTCACTGGCAGCATCCCACCAAATCTGTGTTTTGGCAAGAAGTTAAACATCCTGACTTTGGGCATCAATCAACTCCAAGGTAGCGTACCTCCTGATGTTGGGAGCTGTACAACCCTTACAAGATTAGTCCTCAAACAAAATAATTTAACTGGGCCTCTTCCTCATTTTAAAAGCAGTCGAAATCTCGATTACGTGGATATTGGCAACAACAAAATTCATGGAGCAATTCCATCAAGTTTGGGAAACTGCAGACGTATCACTGACTTAATTTTGTCCATGAACAAATTTACAGGGCCCATACCCTCAGAGCTAGGGAACCTAGTGAATCTTCGGACTTTGAATCTCGCTCACAACAACTTAGAAGGTCCGTTGCCCTCTCAGCTATCAAAGTGCACCAAAATGGACAGGTTTGATGTCGGATTCAATTTCCTAAATGGTTCATTGCCATCAAGTCTGCAGAGCTGGACAAGGCTAACCACTTTAATTTTGAGCGAGAATCACTTTAGTGGGAGCCTCCCATCTTTTTTGTCCGAATTTAAAATGATTTCTGAACTACAACTTGGTGGCAATCAGTTTGGAGGCCAAATTCCCAGATCAGTTGGAGCAATGCAGAAATTGATATATGGTTTGAATCTAAGTTCAAATTGGTTGACAGGTGAAATTCCTGTAGAGATCAGGAACCTGAAAATGTTGCAAAAACTGGATCTGTCTCAGAACAATTTGACAGGAAGCATAGAAGTTCTTGGTGATCTCGTCTCCTTAGTGGAACTCAATATTTCATACAATTCTTTTCGTGGTCTAGTACCAAAGATGCTGATGAAGTTGCTTAATTCTCCCTTGTCATCATTCCTGGGCAATCCTGGCCTATGCATCAGATGTTCAGCGTCAGATGGCTTGGCTTGCACTGAGAGAAGCTCTATAAAATCATGCGATGACAAATCTACTAAACAGAAAGGCTTCAATAAAGTTGAAATTGTGATGATAGCTCTTGGATGCTCCATATCTGTTGTTTTGCTGTTGCTGGGATTAGTTTGTATTGTTGTTTTTGGGAGAGCAGCTAAGCAGGAAAACCACATCTCTTGTGAACAGGGTTCTTCATCCCTTCTTAACCAAGTCATGGAGGCTACAGAAAACCTAAACGATCGGTATATTATTGGTAGAGGAGCCCATGGAATTGTTTATAAAGCTCTGATAGGTCCAGACAAATCTTTTGCTGTGAAGAAGATAGGATTTGCCGCGAGCAAAGGTAAGAACTTGAGCATGGTGAGAGAAATTCAAATTCTTGGGAAAATTAGGCATCGAAATCTGGTAAAATTGGAAGACTTTTGGTTGAGAAAAGGGTGTGGTCTAATTTTGTACAGCTACATGGAAAATGGAAGTCTCCATGATGTTTTGCATGAAAGGACACCGCGACCAACCTTAAACTGGAATATCCGGTATAAGATAGCTGTTGGAATTGCTCATGGATTGGCTTATCTGCACTATGACTGTGACCCTCCCATAGTGCACCGAGACATCAAGCCCAGCAATATACTTCTAGACTCTGATATGGAGCCTCACATTGCTGACTTTGGCATTGCCAAACTTCTGGAACAGTCTTCTTCTGCTTCAAATTCTTCCACTTTTGTGCCGGGTACAATTGGTTATATTGCTCCAGAGAATGCTTATACTACAACAAATAGTAGGGAGTCTGATGTGTACAGTTACGGGGTTGTTTTGCTTGAGCTGATAACCAGAAAGAAGGCAGCCACAGATCCTTCGTACTTGGAGGGTGGTGATGTGATGGATTGGGTTAGGTCTGTGTGGAGGGAAACAGGAGAAATTCATCAAATTGTTGATTCAATCCTTTCAGCCGAATTTCTAGATACCCAGATAATGGAAAACGTTACCAAAGTGCTTATGCTTGCTTTGAGATGTACTGAGAAGGATCCACACAAGAGACCCGCAATGAGAGATGTTATTAATCAATTATCAGATGCTAATCCACGCACAAGAAGTACAAAGGCCTAG 3255 0.4157 MHSTIFMRWLLFVSWFFYAVSALTSDGVTLLSLMRRWTSLPPSINATWLASDSTPCSSWVGVQCDHAHHVVYLNLTGYEISGQLGPEIGNISRLQCLDLTDNNLNGPIPHSFKNLHRLQFLSLAYNQLSGEIPHSLTQIPRLHLVDLSYNILNGSIPTSIGNMSELLQLYLQSNQLSGTIPSSIGNCSKLLELDLDTNQLEGNLPHSLNNLNHLAYFNVAWNRLTGTISLGSSSCKNLVFLDLSFNDFSGGLPLSLGNCSGLSEFAAVNCNLVGNIPPSFGLLTKLSILYLPQNHLSGKIPPEIGNCKSLTELQLYSNRLEGNIPSELGKLRKLVDLELFSNQLTGEIPLSIWKIKGLQYLILYNNSLSGELPLEITELRQLKNISLFNNKFSGVIPQSLGINSSLVLLDFTSNKFTGSIPPNLCFGKKLNILTLGINQLQGSVPPDVGSCTTLTRLVLKQNNLTGPLPHFKSSRNLDYVDIGNNKIHGAIPSSLGNCRRITDLILSMNKFTGPIPSELGNLVNLRTLNLAHNNLEGPLPSQLSKCTKMDRFDVGFNFLNGSLPSSLQSWTRLTTLILSENHFSGSLPSFLSEFKMISELQLGGNQFGGQIPRSVGAMQKLIYGLNLSSNWLTGEIPVEIRNLKMLQKLDLSQNNLTGSIEVLGDLVSLVELNISYNSFRGLVPKMLMKLLNSPLSSFLGNPGLCIRCSASDGLACTERSSIKSCDDKSTKQKGFNKVEIVMIALGCSISVVLLLLGLVCIVVFGRAAKQENHISCEQGSSSLLNQVMEATENLNDRYIIGRGAHGIVYKALIGPDKSFAVKKIGFAASKGKNLSMVREIQILGKIRHRNLVKLEDFWLRKGCGLILYSYMENGSLHDVLHERTPRPTLNWNIRYKIAVGIAHGLAYLHYDCDPPIVHRDIKPSNILLDSDMEPHIADFGIAKLLEQSSSASNSSTFVPGTIGYIAPENAYTTTNSRESDVYSYGVVLLELITRKKAATDPSYLEGGDVMDWVRSVWRETGEIHQIVDSILSAEFLDTQIMENVTKVLMLALRCTEKDPHKRPAMRDVINQLSDANPRTRSTKA* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00093 1084 FunFam Serine/threonine-protein kinase-like protein CCR4 871 1084 - -
Lapu5g00093 1084 Pfam Leucine rich repeat 93 150 IPR001611 GO:0005515
Lapu5g00093 1084 Pfam Leucine rich repeat 475 535 IPR001611 GO:0005515
Lapu5g00093 1084 ProSitePatterns Protein kinases ATP-binding region signature. 800 823 IPR017441 GO:0005524
Lapu5g00093 1084 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 233 324 - -
Lapu5g00093 1084 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 762 870 - -
Lapu5g00093 1084 Gene3D Ribonuclease Inhibitor 376 711 IPR032675 -
Lapu5g00093 1084 SMART LRR_typ_2 163 187 IPR003591 -
Lapu5g00093 1084 SMART LRR_typ_2 522 546 IPR003591 -
Lapu5g00093 1084 SMART LRR_typ_2 283 307 IPR003591 -
Lapu5g00093 1084 SMART LRR_typ_2 666 689 IPR003591 -
Lapu5g00093 1084 SMART LRR_typ_2 643 665 IPR003591 -
Lapu5g00093 1084 SMART LRR_typ_2 115 139 IPR003591 -
Lapu5g00093 1084 ProSiteProfiles Leucine-rich repeat profile. 645 667 IPR001611 GO:0005515
Lapu5g00093 1084 SMART serkin_6 794 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00093 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Lapu5g00093 1084 Gene3D Phosphorylase Kinase; domain 1 764 870 - -
Lapu5g00093 1084 FunFam Leucine-rich repeat receptor-like kinase 27 133 - -
Lapu5g00093 1084 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Lapu5g00093 1084 SUPERFAMILY Protein kinase-like (PK-like) 781 1072 IPR011009 -
Lapu5g00093 1084 SUPERFAMILY RNI-like 385 694 - -
Lapu5g00093 1084 Pfam Protein kinase domain 799 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00093 1084 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 326 424 - -
Lapu5g00093 1084 Gene3D Transferase(Phosphotransferase) domain 1 871 1083 - -
Lapu5g00093 1084 SUPERFAMILY RNI-like 73 393 - -
Lapu5g00093 1084 Gene3D Ribonuclease Inhibitor 266 375 IPR032675 -
Lapu5g00093 1084 MobiDBLite consensus disorder prediction 1063 1084 - -
Lapu5g00093 1084 FunFam Leucine-rich repeat receptor protein kinase EMS1 134 231 - -
Lapu5g00093 1084 Gene3D Ribonuclease Inhibitor 186 265 IPR032675 -
Lapu5g00093 1084 ProSiteProfiles Protein kinase domain profile. 794 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00093 1084 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 333 1072 - -
Lapu5g00093 1084 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 428 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00093 Lapu-Chr5 778859 782833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00093 14 1081 Receptor kinase-like Gene Family AT1G73080 50.996 0.0 1024
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu5g00093 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00093 - - gmx:100778035 1728.76