Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00091 CATAGAGAGATGAGTAACATGAGCTCGACCTCGCGTGGTTCCACCTCCTCCTCCAATGGCCTTCTCACAGTCACCATTGCCAGCAGCCACCCTAAGTGTGACGACCCTGTCGCCGCCAACATCGACGACAATGACGACTTGCTCGTTGATCCCGACGATCCTTTCGATATTACACATACCAAAAATGCTCCTCCAGAGGCCCTCAACCGTTGGAGACAAGCAGCCTTCGTGCTCAATGCGACCAGGCGTTTCAGATACACTCTTGACTTGAAAAAGGAAGAGGAGAAAGACCAAAAGAAAAGCATGATTAGATCCCACGCTCAAGTCATCAGAGCAGCTTTGCTTTTCAGGTTGGCTGGTGAACGGGAACTAGTGACAAGTACAGCAGCAGCGGCAGCCCCAACTCCAGTTGGTGAGTACACAGTTGGGCTCGAACAACTTGTTTCAATGACTAAGAATCAGAATATTTCTGCTTTACAACAATATGGAGGGGTTAAAGGCTTATCAAATTTACTCAAATCAATTCCTGATAAAGGGATTAGTGGAGATGAGGTTGATCTACTAAAGAGGAAAAATGCATTTGGGACCAATACATATCCTCGGAAAAAGGGGAGAAGTTTCTGGAGGTTTCTATGGGAATCTTGGCAAGATCTTACTCTTATAATATTGATTATAGCAGCTGTGGTGTCATTGATACTTGGAATAAAAACAGAGGGCTTGGAAGAAGGGTGGTACGATGGAGGAAGCATTGCTTTCGCTGTTTTTCTTGTCATTATAGTTACAGCTGTCAGTGATTATCGCCAATCTCTGCAGTTTCAGAACTTGAATGCAGAAAAACAAAATATAAAATTGGAGGTCATTAGAGGTGGCAGAACAATACAAATCTCGATATTTGACATTGTTGTGGGTGATCTAGTGCCCCTTAAAATAGGAGATCAGGTTCCCGCCGATGGAGTTGTAATCACTGGTCATTCTCTAGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATTCACAAGGATCACAAAGCACCTTTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTGCCATGCTGGTAACTGGTGTTGGTATAAATACCGAGTGGGGACTGTTGATGGCAAGTATCTCAGAGGATACTGGAGAAGAGACTCCATTACAGGTTCGTTTGAATGGAGTGGCAACTTTTATTGGCATAGTGGGGCTTACTGTAGCTGTTTGTGTCCTTGCAGTCCTCTTGGGAAGATACTTCTATGGCCGTACGAAAGATTTAGATGGGAAAGTACAATTTGTTGCTGGAGAGACTAGTATTAGTGAAACAGTAGATGGAGTCATCAAAATTTTTACCATTGCAGTAACAATTGTGGTGGTTGCAGTGCCCGAAGGTCTACCTTTAGCAGTTACGTTAACTTTGGCATACTCGATGCGGAAAATGATGGCAGACAAAGCGTTGGTGCGAAGGCTGTCAGCGTGCGAAACTATGGGATCTGCTACAACAATTTGTAGTGATAAGACCGGAACTTTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAGGAAGAAACTTAATAAACCAGATGACTTGACAGAATTGCATCCGGAAGTTCTGTCTCTGATAAATGAGGGCATTGCACAGAATACAACTGGCAATGTTTTTGTGCCTAAGGATGGTGGAGAGATGGAGGTGTCGGGATCTCCTACAGAGAAGGCAATTCTTTCTTGGGCAGTGAAGTTGGGGATGAATTTTGATTTTATTAGATCAAATTCAACAATTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGAGGTGTTGCGGTGAAACTGCCAGACAATGCAGTACATATACATTGGAAAGGAGCTGCGGAGATAGTTCTAGGAACATGTACTCAATATCTTGATTCTGATGGTCACTTGAAATCTATTGAAGAAGAGAAGGTATTCTTCAAGAAAGGTATCGAAGACATGGCTGCTCAGAGCTTGCGTTGTGTTGCCATAGCATATAGATCGTATGATTTCAAAAAAATTCCATCTAATGAGGAGGAATTAGATCAGTGGTCCTTGCCAGAACACCAGCTGGTCTTGCTTGCTATCGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAGGAAGCTGTGAAAGTATGCACTGAAGCTGGCGTTAAGGTACGCATGGTTACCGGTGACAATCTTCAAACTGCAAAAGCAATAGCTTTGGAGTGTGGAATACTGATGTCTATTGAAGAGGCTGTTGAGCCAAATATAATTGAAGGAAAGACATTCCGTGAACTATCTGAAATCCAAAGGGAACAAGTTGCAAAAAGAATAACAGTGATGGGGAGGTCTTCTCCTACTGACAAGTTGTTGCTTGTGCAAGCCTTACGTAAAGGTGGTGAAGTTGTTGCTGTCACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGCCTTTCTATGGGCATCCAAGGAACAGAAGTTGCAAAAGAAAGTTCAGATATTATTATCTTAGATGATAACTTTGCATCGGTAGTAAAGGTTGTTCGTTGGGGTCGTTCTGTATATGCAAATATTCAGAAATTTATTCAGTTCCAGCTCACTGTTAATGTTGCGGCTCTTGTAATAAATGTTGTAGCTGCGATATCTTCTGGTGATGTTCCTTTAAATGCTGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGAGCTCTTGCACTGGCTACGGAACCGCCAACAGACAGCCTTATGCACAGATCACCAGTTGGCCGAAGGGAACCTCTTATAACGAATATCATGTGGAGGAACTTGTTCGTACAGGCCATCTATCAAGTCATTGTTCTTCTGATTCTTAACTTTGGTGGTGAAAGTATTCTGCGTAATGAGGATTCTACAGTCCATACCATACAATTGAAGAATACTTTAATTTTCAATGCATTCGTCTTTAGCCAAATATTCAACGAGTTCAATGCTCGAAAACCAGAAGAGATGAACGTGTTCCGGGGAGTGACTAAGAACCGTCTCTTCATGGGAATTGTTGGAATGACCTTTGTGCTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCACAACGACAGTGAGGCTTAACTGGAGGTTGTGGCTTGCCTCAGTTTGTATTGGGCTTTTAAGCTGGCCTCTTGCCATTGTTGGAAAACTTATTCCGGTTCCCAAAACACCACTGTCCCGATATTTCACCAAATCACTCAGGAGATTGAAGAAGTCCAAGTCCCATGCACCA 3297 0.431 HREMSNMSSTSRGSTSSSNGLLTVTIASSHPKCDDPVAANIDDNDDLLVDPDDPFDITHTKNAPPEALNRWRQAAFVLNATRRFRYTLDLKKEEEKDQKKSMIRSHAQVIRAALLFRLAGERELVTSTAAAAAPTPVGEYTVGLEQLVSMTKNQNISALQQYGGVKGLSNLLKSIPDKGISGDEVDLLKRKNAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLILGIKTEGLEEGWYDGGSIAFAVFLVIIVTAVSDYRQSLQFQNLNAEKQNIKLEVIRGGRTIQISIFDIVVGDLVPLKIGDQVPADGVVITGHSLAIDESSMTGESKIIHKDHKAPFLMSGCKVADGVGAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVCVLAVLLGRYFYGRTKDLDGKVQFVAGETSISETVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGRKKLNKPDDLTELHPEVLSLINEGIAQNTTGNVFVPKDGGEMEVSGSPTEKAILSWAVKLGMNFDFIRSNSTILHVFPFNSEKKRGGVAVKLPDNAVHIHWKGAAEIVLGTCTQYLDSDGHLKSIEEEKVFFKKGIEDMAAQSLRCVAIAYRSYDFKKIPSNEEELDQWSLPEHQLVLLAIVGIKDPCRPGVKEAVKVCTEAGVKVRMVTGDNLQTAKAIALECGILMSIEEAVEPNIIEGKTFRELSEIQREQVAKRITVMGRSSPTDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMHRSPVGRREPLITNIMWRNLFVQAIYQVIVLLILNFGGESILRNEDSTVHTIQLKNTLIFNAFVFSQIFNEFNARKPEEMNVFRGVTKNRLFMGIVGMTFVLQIIIIEFLGKFTTTVRLNWRLWLASVCIGLLSWPLAIVGKLIPVPKTPLSRYFTKSLRRLKKSKSHAP 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00091 1099 PANTHER CATION TRANSPORTING ATPASE 125 1075 - -
Lapu5g00091 1099 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 512 709 IPR023299 GO:0000166
Lapu5g00091 1099 Pfam E1-E2 ATPase 281 483 - -
Lapu5g00091 1099 FunFam Calcium-transporting ATPase 515 712 - -
Lapu5g00091 1099 ProSitePatterns E1-E2 ATPases phosphorylation site. 507 513 IPR018303 -
Lapu5g00091 1099 FunFam Calcium-transporting ATPase 829 1077 - -
Lapu5g00091 1099 PRINTS P-type cation-transporting ATPase superfamily signature 836 848 - -
Lapu5g00091 1099 PRINTS P-type cation-transporting ATPase superfamily signature 812 831 - -
Lapu5g00091 1099 PRINTS P-type cation-transporting ATPase superfamily signature 705 716 - -
Lapu5g00091 1099 PRINTS P-type cation-transporting ATPase superfamily signature 727 737 - -
Lapu5g00091 1099 PRINTS P-type cation-transporting ATPase superfamily signature 505 519 - -
Lapu5g00091 1099 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Lapu5g00091 1099 CDD P-type_ATPase_Ca_PMCA-like 187 945 - -
Lapu5g00091 1099 NCBIfam calcium-translocating P-type ATPase, PMCA-type 151 1075 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lapu5g00091 1099 NCBIfam HAD-IC family P-type ATPase 442 534 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu5g00091 1099 NCBIfam HAD-IC family P-type ATPase 779 892 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu5g00091 1099 Gene3D - 65 117 - -
Lapu5g00091 1099 FunFam Calcium-transporting ATPase 213 270 - -
Lapu5g00091 1099 Pfam Cation transporting ATPase, C-terminus 897 1073 IPR006068 -
Lapu5g00091 1099 Gene3D - 188 381 - -
Lapu5g00091 1099 Gene3D - 213 1063 - -
Lapu5g00091 1099 FunFam Calcium-transporting ATPase 9 plasma membrane-type 359 529 - -
Lapu5g00091 1099 Pfam Cation transporter/ATPase, N-terminus 163 230 IPR004014 -
Lapu5g00091 1099 SUPERFAMILY HAD-like 503 917 IPR036412 -
Lapu5g00091 1099 FunFam Calcium-transporting ATPase 705 857 - -
Lapu5g00091 1099 SFLD C1.7: P-type atpase like 487 864 - -
Lapu5g00091 1099 SUPERFAMILY Calcium ATPase, transduction domain A 282 378 IPR008250 -
Lapu5g00091 1099 Pfam haloacid dehalogenase-like hydrolase 502 826 - -
Lapu5g00091 1099 SFLD p-type atpase 487 864 IPR044492 -
Lapu5g00091 1099 SUPERFAMILY Calcium ATPase, transmembrane domain M 163 1075 IPR023298 -
Lapu5g00091 1099 SMART Cation_ATPase_N_a_2 161 235 IPR004014 -
Lapu5g00091 1099 PRINTS Sodium/potassium-transporting ATPase signature 624 642 - -
Lapu5g00091 1099 PRINTS Sodium/potassium-transporting ATPase signature 498 519 - -
Lapu5g00091 1099 PRINTS Sodium/potassium-transporting ATPase signature 248 268 - -
Lapu5g00091 1099 FunFam Calcium-transporting ATPase 63 119 - -
Lapu5g00091 1099 FunFam Calcium-transporting ATPase 260 381 - -
Lapu5g00091 1099 Gene3D - 502 857 IPR023214 -
Lapu5g00091 1099 Gene3D - 515 712 IPR023299 GO:0000166
Lapu5g00091 1099 Pfam Ca2+-ATPase N terminal autoinhibitory domain 52 95 IPR024750 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00091 Lapu-Chr5 755847 769953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00091 14 1096 Primary Pumps ATPases AT3G21180 75.414 0.0 1654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00091 K01537 - gmx:100817367 1890.93