Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00085 ATGGAAAGCTTAAAAACACCTTTCAAGGGTGTTAAAAACGACCTTCGAGGAAGAGCAATGTACTATAAAGATGATTGGACAATTGGTCTCTACGCAGGAGCCGGAATATTGGCCCCAACTGCCTATATTTTCTTTGCTTCTGCTCTTCCAGTCATTGCCTTTGGCGAGCAGCTAAGTAGAGACACAGATGGAAGCTTGAGTACAGTAGAAACGCTGGCTTCTACAGCTATTTGTGGAATCATACACTCAATTTTGGGTGGCCAACCTCTCTTAATCGTAGGAGTTGCTGAACCCACTATCATTATGTACACCTATTTGTACAACTTTGCCAAGGATAAGGATTCCGTGGGACGAGAACTCTTTTTAGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTGTTTCTTCTAGCAATATTCAATGCTGGAAATATCATCACTAGATTTACAAGGATTGCGGGTGAGCTTTTTGGCATGTTGATCACAATTTTGTTCATTCAACAGGCTATAAAGGGAATTGTAAGCGAGTTTAATGTTCCCAAAGAGGGAGACTCAACATCGGAAAAGTACCAATTCGATTGGCTGTATGCAAATGGATTGCTGGGTATCATATTCACCTCTGGCCTTCTCTATACGTCCTTAAAGAGCAGAAGAGCAAGGTCATGGTTATATGGCACAGGGTGGTTTAGAAGTTTCATTGCAGACTATGGGGTGCCTTTCATGGTGGTGGTGTGGACAGCACTATCATTCATAGTACCGAGTAAAGTGCCTTCTGGAGTTCCCAGAAGACTCACCTCTCCTCTTGCTTGGGACTCTACGTCTTTACATCACTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCGTCATATATTTTTGCTGCTATTATTCCTGCCTTAATGATAGCGGGGCTTTACTTCTTTGACCATAGTGTTGCTGCCCAGATGGCACAACAGAAGGAATTCAATCTGAAGAAACCTTCTGCATACCACTATGACATATTGTTGCTAGGACTAACGACTTTGCTTTGTGGATTAATTGGCTTACCACCTTCAAATGGAGTTCTTCCTCAATCTCCTATGCACACCAAGAGCCTGGCTGTTCTCAAGAAACAGTTGATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAATCAGAAAGCTAGCAATTCCGAAATCTATGGGAAGATGCAAGCAGTGTTTATAGAAATGGATGACTGTCCAGATAATCATTTAGTGGTCAAAGAACTAGAAGATTTGAAAGAGGTTGTCTTAAACGGTGAAGACCGAGGACATGACTACAAGAGTACCTTTGATCCTGAGAAACACATTGATGCATATTTGCCTGTCAGAGTAAAAGAGCAGAGAGTGAGCAATCTTTTACAATCAATCCTTGTAGGAGTATCAGTCTTTGGCATGCCTGCCATAAAAAAGATACCAACTTCAGTTCTGTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATCCTACTCCTTTTTGTTACACCTAGTCGGTGGTACAAGTTGTCGGAGGGGGATCGTGCTTCTTTTGTTGAGTCAGTACCTTATAGATACATAGTATTCTTCACACTTTTCCAATGTGTGTATTTCTTGGTTTGCTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCCTTGCCTTTCTTTTTCCTGATCACATTGAGGCAGCATATACTCCCCAAGCTGTTCAAGCCTCACCATCTTAGGGAACTAGATGCAGCTGAATATGAAGAAATAGTTGCTGCTCCAGGACTAACTTTCAGGTTTACTTTTAACAGGAGGTAG 1851 0.4219 MESLKTPFKGVKNDLRGRAMYYKDDWTIGLYAGAGILAPTAYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKDKDSVGRELFLAWAGWVCVWTALLLFLLAIFNAGNIITRFTRIAGELFGMLITILFIQQAIKGIVSEFNVPKEGDSTSEKYQFDWLYANGLLGIIFTSGLLYTSLKSRRARSWLYGTGWFRSFIADYGVPFMVVVWTALSFIVPSKVPSGVPRRLTSPLAWDSTSLHHWTVIKDMGKVSPSYIFAAIIPALMIAGLYFFDHSVAAQMAQQKEFNLKKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESINQKASNSEIYGKMQAVFIEMDDCPDNHLVVKELEDLKEVVLNGEDRGHDYKSTFDPEKHIDAYLPVRVKEQRVSNLLQSILVGVSVFGMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWYKLSEGDRASFVESVPYRYIVFFTLFQCVYFLVCFGVTWIPIAGILFPLPFFFLITLRQHILPKLFKPHHLRELDAAEYEEIVAAPGLTFRFTFNRR* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00085 616 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016020
Lapu5g00085 616 Pfam HCO3- transporter family 200 374 IPR011531 GO:0006820|GO:0016020
Lapu5g00085 616 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Lapu5g00085 616 PANTHER ANION EXCHANGE PROTEIN 5 601 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lapu5g00085 616 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00085 Lapu-Chr5 718022 721592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00085 1 614 Antiporters AT1G74810 70.275 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00085 K24194 - gmx:100811184 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01865 9 33491559 33495487 Lapu5g00085 5 718022 721592 ECH
Lapu5g00085 5 718022 721592 Lapu5g00085 5 718022 721592 ECH