Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00073 ATGCCTTCTGCGGATTCATCGTCAACTTCCTCAGAAACCATCTGTGTCACCGGCGCAGGTGGCTTCATCGCATCTTGGATGGTCAAACTTCTCCTGGAAAAAGGCTACACTGTCAGAGGAACCCTCAGAAACCCAGATGATCCCAAGAACCGACACCTGAAAGAGTTTGAAGGAGCCTCCGACAGACTAACTCTGCATAAGGTTGACCTCCTTGACCTCCACTCCGTTAGATCAATCATTCACGGCTGTCATGGTGTCTTTCACACAGCTTCTCCCGTCACTGATAACCCCGAAGAAATGGTGGAGCCGGCGGTGAATGGAGCGAAGAATGTGATCATAGCAGCTGCAGAGGCAAAAGTGCGACGTGTGGTGTTCACCTCATCAATTGGTGCCGTCTATATGGACCCCAAAAGGAGCATCGATTTGGTGGTCGACGAATCTTGTTGGAGTGATTTAGAATATTGCAAGAACACTAAGAATTGGTATTGCTATGGGAAGGCTGTGGCTGAACAAGCAGCATGGGACACGGCAAAAGAGAAGGGGGTGGACTTGGTTGTAGTGAACCCAGTATTGGTTCTTGGACCATTACTACAACCAACCATCAATGCTAGCACGATTCACATCCTCAAGTACCTCACTGGCTCTGCTAAGACCTATGCAAATGCCACACAGGCTTATGTGCATGTGAGGGACGTGGCATTGGCCCACATACTTGTTTATGAGAAGCCCTCTGCTTCTGGTCGATACTTATGTGCTGAAAGCTCCCTGCACCGTGGAGAACTAGTTGAAATTCTGGCAAAGTATTTCCCTGAGTACCCAGTTCCCACAAAGTGCTCAGATGAAAAGAATCCCAGGGCAAAACCCTACACCTTTTCAAATCAGAAGCTGAAAGATTTGGGATTGGAATTCACTCCAGTGAGTCAGTGTCTATATGAAACAGTTAAGAGTCTGCAGGAGAAAGGCCACCTTCCTGTTCCTGCAAGGCAGGAAGATTCAACTACAGTGAAATCCTAA 1014 0.4793 MPSADSSSTSSETICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNRHLKEFEGASDRLTLHKVDLLDLHSVRSIIHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPKRSIDLVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWDTAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPEYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPVPARQEDSTTVKS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00073 337 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Lapu5g00073 337 FunFam Cinnamoyl-CoA reductase 1 5 336 - -
Lapu5g00073 337 CDD FR_SDR_e 15 301 - -
Lapu5g00073 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 - -
Lapu5g00073 337 Gene3D - 3 337 - -
Lapu5g00073 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00073 Lapu-Chr5 614666 617896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00073 14 277 Monolignol Biosynthesis Gene Families AT1G80820 75.379 5.32e-144 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00073 K09753 - gmx:100789070 628.632