Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00053 ATGGCTAACAGAAACGATTATTCTTCGTTACCCGTTAACTCCTACTTGGAATTGCAGCGTCAAAGCGAGTCGTCAAAATCCTTGCGCCCGCCTTCTTTTGACGATTCCGAGGTGTATTTGGGATCCAAGATCGATGACGAGGAGTACGATGAGGATTTGGAAATCGACGTCGATAATTACCCTCTTGTTGTTGTGGGGTCCAATCAAGGCTCTGGGATACCTGGGGCTGTTTTCAATTTGACCACCACAGTTATTGGGGCAGGGATCATGGCTCTCCCTGCCACTATGAAAGTTCTAGGACTGGTCTTGGGGATTCTTTTGATAATTGTTATGGGGATTTTGTCTGAAATTAGTGTGGAATTGTTGGTGAGGTTTTCTGTTTTGTGTAAGGCGTCCTCGTATGGGGAGGTTGTTCAGCATGCAATGGGAAGGCCTGTGAGGATTTTGTCTGAAATCTGTATTATTGTGAACAATGCTGGTGTTTTGGTGGTTTACCTGATAATCATGGGGGATGTCATGTCGGGTTCCTCTCACCATATGGGGGTTTTTGATCAGCTAATGGGGAATGGGGCGTGGGATCAAAGGAAGATCGTGGTTTTAGTTGTCATGGTGGTTTTCCTTGCTCCCCTTTGTTCACTTGACAAGATTGATTCATTGAGCTTGACCTCGGCTGCCTCCGTGGCTCTTGCTGTCTTGTTTGTCATTGTTACTTTTACAGTTGCTTTCATTAAGCTCGTGGAAGGACGGATTGATTCTCCAAGAATGGCTCCTGATCTTAGCTCCAAAGCTGCAGTTTTGGATTTTCTTGTTGCGATACCTATCATGACCAATGCCTATGTTTGCCATTTTAATGTGCAGCCTATATATAATGAGCTTGAACAACGGTCTCCTCAGAAGATGAACAGAGTTGGGAGGTACACCACAGTTTTGTGCATCGTAGTTTATTCTTCCACTGCCATATCGGGTTACCTGCTCTTTGGGAAAGACACAGAGGCTGATGTGCTGACTAATTTTGACAGGGACCTTGGAATTCGGTATAGCTCGGTCTTGAACTATATTGTTCGGATTGGCTACATTCTTCATTTAATACTTGTTTTTCCTGTTATTCATTTCTCACTGCGCCAAACAGTGGACGCGTTAGTGTTTGAGGGATCACCTCCTCTTTCAGAAAGTAGGAAGAGATCTTTGGGGTTGACTGCGGTTCTGTTGGTCCTCATATATATTGGGTCTACTATGATTCCAAACATATGGACAGCTTTTAAGTTCACTGGGGCAACCACCGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTGTTTCATTAAGACTAAGCCATCTGGGAGATATAAGCTATGGGGAATGGATTTTATCATGGTTGATGTTGGTATTGGCTGTGACTGTTAGCGTTGTAGGAGTTGTTAGCAATGTCTATAGCCTTGAGAGTAAGTCTTAG 1452 0.4387 MANRNDYSSLPVNSYLELQRQSESSKSLRPPSFDDSEVYLGSKIDDEEYDEDLEIDVDNYPLVVVGSNQGSGIPGAVFNLTTTVIGAGIMALPATMKVLGLVLGILLIIVMGILSEISVELLVRFSVLCKASSYGEVVQHAMGRPVRILSEICIIVNNAGVLVVYLIIMGDVMSGSSHHMGVFDQLMGNGAWDQRKIVVLVVMVVFLAPLCSLDKIDSLSLTSAASVALAVLFVIVTFTVAFIKLVEGRIDSPRMAPDLSSKAAVLDFLVAIPIMTNAYVCHFNVQPIYNELEQRSPQKMNRVGRYTTVLCIVVYSSTAISGYLLFGKDTEADVLTNFDRDLGIRYSSVLNYIVRIGYILHLILVFPVIHFSLRQTVDALVFEGSPPLSESRKRSLGLTAVLLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVSLRLSHLGDISYGEWILSWLMLVLAVTVSVVGVVSNVYSLESKS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00053 483 PANTHER AMINO ACID TRANSPORTER 68 469 - -
Lapu5g00053 483 Pfam Transmembrane amino acid transporter protein 72 473 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00053 Lapu-Chr5 453082 455645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00053 7 483 Amino Acid or Auxin Permease AAAP Family AT1G80510 70.722 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00053 - - gmx:100791860 789.26