Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00039 ATGAGTCCCTGTCTTCTTCTACTCCTACAAGTACTATGTTGCACGTTGTTTTTGCCGCCTAATGTAACGGCCTTCACGGTGATCTTGTCAGATTCCGGCGTGCCATCAACCCTAGTAGATGGTCCACAAACGGGGTTTTCCATGAACCAAGACGGTGCCCGAACGGATAAGCGAGAGCAAGAGGCGGTGTACGACATTATGAGAGCCACCGGAAACGACTGGGCCACCGACATCCCCGACGTGTGCCGTGGTCGCTGGCACGGCATCGAGTGCATGCCCGACAAGGGCAACGTTTTCCACGTGGTATCCCTTTCGTTCGGAGCACTCTCTGATGATACCGCTTTTCCGACATGCGACCCGACCCGCTCCGTTATCTCACCCTCCATCACACACCTCCCCCACCTCAAGACCTTGTTCTTTTACCGTTGTTTCAGTTACAACCCCCAGCCCATCCCACCCTTCTTGGGCCTATTGGGCTCGACCTTACAAACATTGGTTCTCAGAGAAAACGGCCACGTTGGGCCTATTCCTGTTGAATTGGGCAACCTTACGCGTTTGAAGGTGCTTGACCTTCACAAAAACAACCTCAACGGCTCTATACCTCTCTCATTGGGCCGGATCACAAGTTTAAGGTCTTTGGATTTGAGTGCCAACAAATTAACCGGTTCCATACCCGGTTTCACCTTCCCCTCTTTGAACGTGTTGGACCTCAGCCAGAATCTTCTAATGGGCTCAATTCCTTCTCCTGTTTGGGAGTGTCATTCTCTCATCAAATTGGATTTCAGCCGCAACAGGCTGGTGGGCCCGTTGCCGGAGAAGCCCATGAAGCTGAAAGACCTTATGCTTTTGGATTTAAGCTACAACCGTATCCAAGGCCCATTTCCTGAGTCAATAAAAAGCCTGAGTTCGCTTCAGGCTTTAATCCTGAAAGGAAACCCAATGGGCTGGAAGATGATACCCGGAGATGGGTTTGATGGTATGAAAGCCCTGATGATTGTTATTTTGTCGAACATGAATTTGCAAGGGGCGGTCAAAGGAAGAGGGAAGAAACAACCTCCATGGCGGGTGTTTTCTTTGAAGGAATTGCACTCGGCTACTAATAATTTCAACTATGATAACAAGCTAGGAGAAGGGGGATTTGGCAGTGTGTACTGGGGCCAGCTTTGGGATGGATCGCAGATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCTAGAGTTCGTCACAAGAATCTTCTCAGTCTACGTGGCTATTGTGCTGAAGGTCAGGAACGGTTAATTGTATATGATTATATGCCGAATTTGAGCTTGCTCTCTCATCTTCATGGACAGCACTCAGCAGAATCCCTTCTTGATTGGAACCGGCGGATGAACATCGCAATTGGGTCAGCTGAGGGAATTGCATATCTTCACCACCAGTCAACACCACACATCATCCACAGAGATATCAAAGCAAGCAATGTGTTGTTGGATTCAGATTTCCAGGCACGGGTTGCTGATTTTGGTTTCGCAAAGTTGATCCCTGATGGGGCTACACATGTGACTACAAGAGTTAAGGGCACCCTGGGCTACCTTGCACCTGAATATGCTATGCTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTCGGAATTCTCCTTCTAGAACTTGCTAGTGGCAAAAAACCACTTGAAAAACTTAGTTCTACAGTAAAGAGAACGATAAATGATTGGGCACTGCCATTGGCTTGTGAGAAGAAGTTTAGTGAGCTAGCAGATCCAAAACTGGAGGGCAACTATGTGGAGGAAGAGCTTAGAAGAGTTGTTTTAATTGCTCTATTATGTGCTCAGAGTCAGTCAGAGACGAGGCCCACCATACTTGAGGTGGTAGAACTGCTGAAGGGAGAATCTAAAGATAAGTTAGTTCAGCTGGAAAATAATGAACTCTTTAAAAACCCTCCAGCTGCAGGACATACTGATGATGAGACCGTTGCACCTGAAGGAAGTTCAGATTTCATCTCAGAAGAGAAAGAATCAAAACCTGAGTTGGAAGAGAAAACTGGGCCATGA 2091 0.4715 MSPCLLLLLQVLCCTLFLPPNVTAFTVILSDSGVPSTLVDGPQTGFSMNQDGARTDKREQEAVYDIMRATGNDWATDIPDVCRGRWHGIECMPDKGNVFHVVSLSFGALSDDTAFPTCDPTRSVISPSITHLPHLKTLFFYRCFSYNPQPIPPFLGLLGSTLQTLVLRENGHVGPIPVELGNLTRLKVLDLHKNNLNGSIPLSLGRITSLRSLDLSANKLTGSIPGFTFPSLNVLDLSQNLLMGSIPSPVWECHSLIKLDFSRNRLVGPLPEKPMKLKDLMLLDLSYNRIQGPFPESIKSLSSLQALILKGNPMGWKMIPGDGFDGMKALMIVILSNMNLQGAVKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAESLLDWNRRMNIAIGSAEGIAYLHHQSTPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSTVKRTINDWALPLACEKKFSELADPKLEGNYVEEELRRVVLIALLCAQSQSETRPTILEVVELLKGESKDKLVQLENNELFKNPPAAGHTDDETVAPEGSSDFISEEKESKPELEEKTGP* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00039 696 MobiDBLite consensus disorder prediction 654 696 - -
Lapu5g00039 696 Pfam Leucine Rich repeats (2 copies) 208 246 IPR025875 -
Lapu5g00039 696 SMART serkin_6 369 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00039 696 Gene3D Transferase(Phosphotransferase) domain 1 445 657 - -
Lapu5g00039 696 Gene3D Phosphorylase Kinase; domain 1 349 444 - -
Lapu5g00039 696 FunFam Piriformospora indica-insensitive protein 2 58 225 - -
Lapu5g00039 696 SUPERFAMILY Protein kinase-like (PK-like) 352 640 IPR011009 -
Lapu5g00039 696 SUPERFAMILY L domain-like 80 343 - -
Lapu5g00039 696 FunFam PTI1-like tyrosine-protein kinase At3g15890 445 656 - -
Lapu5g00039 696 PRINTS Leucine-rich repeat signature 210 223 - -
Lapu5g00039 696 PRINTS Leucine-rich repeat signature 277 290 - -
Lapu5g00039 696 MobiDBLite consensus disorder prediction 678 696 - -
Lapu5g00039 696 Gene3D Ribonuclease Inhibitor 228 348 IPR032675 -
Lapu5g00039 696 Gene3D Ribonuclease Inhibitor 59 227 IPR032675 -
Lapu5g00039 696 ProSiteProfiles Leucine-rich repeat profile. 209 231 IPR001611 GO:0005515
Lapu5g00039 696 Pfam Leucine rich repeat 256 313 IPR001611 GO:0005515
Lapu5g00039 696 FunFam Leucine-rich repeat receptor protein kinase EMS1 227 322 - -
Lapu5g00039 696 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Lapu5g00039 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Lapu5g00039 696 ProSiteProfiles Protein kinase domain profile. 369 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00039 696 FunFam PTI1-like tyrosine-protein kinase At3g15890 341 444 - -
Lapu5g00039 696 Pfam Protein kinase domain 370 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00039 696 Coils Coil 634 654 - -
Lapu5g00039 696 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 346 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00039 Lapu-Chr5 358854 368281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00039 164 642 Receptor kinase-like Gene Family AT5G45780 38.028 9.42e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lapu5g00039 Pkinase 6.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00039 - - gmx:100788153 669.077