Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00034 ATGGGCATATTAAGATGGGGAACCTTGCTTTTCTGTGTGTTCCTTTTGTTTAGTACCTGTCTGGCCAAAGATCAACACATTCTTCAGATATATCCTGGCTTCAGTGCATCTCAACCTGACTGGAGCGACCATAATGGTTTTTTCTTGATATCCAACAGCTCAGCTTTCGGCTTTGGATTCTTTACTACTCTCGATGTTTCATCGTTTGTTTTAGTTGTCATTCACTTGAGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTCGTTGGGAAATCTGCTAAATTTGAGTTTGCCCATAGTGGGAATGTATATTTGGAAGGTGAGGGTGGCGTAGTTTGGGCAACAAATACAACAGGGCATAAAGTGAGAGCCATGGAGTTGCTAGACTCAGGGAATTTGGTGTTGCTTGGGGATAATGGGACAGCTCTATGGCAAAGTTTTAGCCATCCCACTGATACTCTTTTGCCCGGGCAAGCCTTTGTGGAAGGAATGACACTCAAAAGCTTCCACAACAGCTTGAACATGTATTATTATCTTGGTTACAAGGCAGGTGATTTGTTTCTCTACGCAGGATTTGAAACTTCACAAGTGTATTGGTCCCTATCAGGAGAAGAGACTCAGAGAAGCTCAAAAAATATCACTAGCAATGTTCACTCAGCTTTTCTGGAGTCCAATTCATGGAGATTTTACGACATAAATCGAGCATTGCTGTGGAAAATTGACTTCTCTGACCACTCAGATCCCAAGTCATTGTGGGCTGCTACCTTGGATCCAACTGGAGCTATCACTTTTTACGATCTTAACAAAGGGAGATCTCCTAACCCTGAGGCAGTTAAGGTACCACAAGACCCCTGTGGCACTCCCCAGCCTTGTGATCCGTATTATGTTTGCTTCTTTGAAAACTGGTGCATCTGCCCCAAACTTCTCAAATCTCGTTTCAACTGCAAACCTCCCAACATCTCCACCTGTTCCAGTACTTCAACAGAACTTGTATATGTCGGCGAAGAGCTTGATTATTTTGCTCTCAAGTACACTACACCGGTCTCAAAATCAACCCTGAATTCTTGCAAAGAGACTTGTTTAGGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACAGTACCGGAAGATGCTTTCATTTTGACGAGACTGGGAGTTTCCAACGCAATAAGGGGCCCACTGGTGGTTATGTTTCATTCATGAAGGTCTCCATTAGTAGTGATGATGGGCATGGCAACAAAAATGGAAGGAATGACACGGTGCTAGTAGTAGTCATAGTAGTTCTCACAGTTCTGGTTATTGTTGGTCTTGTCACAGGATTCTGGTACTACTACAAGAGGAAGAAGAATGTTGCTAGGTATCCTCAAGACACCTTTGAGGAAGATGATGATTTCTTGGACAGTATCTCCGGGATGCCTGCACGTTTTACTTTTGCTGCTCTTTGTAGAGCAACTAAGGACTTTTCCACAAAAATTGGGGAAGGAGGTTTTGGCTCAGTGTATTTAGGTGAGCTTGAAGATGGCACCCAGTTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGCGCAAAAGAGTTTAAAGCAGAAGTGTCCATAATTGGAAGTATTCATCATGTTCATTTGGTCAAGCTCAAAGGGTTCTGTGCTGAGGGTCCTCATCGCCTTCTTGTCTACGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAGAACAGTTTCTTGTTGAACTGGGAGACAAGGTACAACATTGCAATAGGCACGGCTAAGGGATTGGCCTATCTCCACGAGGAGTGTGAAGTGAGGATTATCCACTGTGATATCAAGCCACAAAATGTTCTTCTTGATGATAATTTCACAGCTAAGGTTTCAGATTTTGGATTGGCTAAGCTAATGAGCCGTGAGCAGAGCCATGTGTTCACAACTCTGAGGGGCACAAGAGGGTATTTAGCACCAGAATGGATTACTAACTATGCAATTTCGGAGAAGAGTGATGTGTTCAGCTATGGCATGCTCTTGCTTGAGATAATTGGAGGGAGGAAGAACTATGATCAATGGGAAGGGGCGGAGAAGGCACATTTTCCTTCCTATGTGTTCAGAATGATGGATGAAGGGAAACTGAAAGAAGTTCTTGATTCAAAGATAGATATTGATGAGAAGGATGAAAGGGTTGAGGCTGCTCTAAAAGTTGCTCTTTGGTGCATACAAGATGACGTGAGTTTGAGGCCGTCCATGACGAAGGTAGCTCAGATGCTTGAAGGTTTGTGTCCGGTACCTGATCCACCCTCATTATCTCAAGCCGGTACTTATTCAGCTTTCATGAAATTGAGTAGTGGAGAAGCCACTTCATCGGGTCAGGCTAGTTTTTTTAGTAATGTGCCCATGTCATGTGTTCAATTATCAGGACCAAGATGA 2433 0.4349 MGILRWGTLLFCVFLLFSTCLAKDQHILQIYPGFSASQPDWSDHNGFFLISNSSAFGFGFFTTLDVSSFVLVVIHLSSYKVVWTANRGLLVGKSAKFEFAHSGNVYLEGEGGVVWATNTTGHKVRAMELLDSGNLVLLGDNGTALWQSFSHPTDTLLPGQAFVEGMTLKSFHNSLNMYYYLGYKAGDLFLYAGFETSQVYWSLSGEETQRSSKNITSNVHSAFLESNSWRFYDINRALLWKIDFSDHSDPKSLWAATLDPTGAITFYDLNKGRSPNPEAVKVPQDPCGTPQPCDPYYVCFFENWCICPKLLKSRFNCKPPNISTCSSTSTELVYVGEELDYFALKYTTPVSKSTLNSCKETCLGNCSCLVLFFENSTGRCFHFDETGSFQRNKGPTGGYVSFMKVSISSDDGHGNKNGRNDTVLVVVIVVLTVLVIVGLVTGFWYYYKRKKNVARYPQDTFEEDDDFLDSISGMPARFTFAALCRATKDFSTKIGEGGFGSVYLGELEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENSFLLNWETRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIIGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLKEVLDSKIDIDEKDERVEAALKVALWCIQDDVSLRPSMTKVAQMLEGLCPVPDPPSLSQAGTYSAFMKLSSGEATSSGQASFFSNVPMSCVQLSGPR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00034 810 SUPERFAMILY Protein kinase-like (PK-like) 471 759 IPR011009 -
Lapu5g00034 810 FunFam serine/threonine-protein kinase PBS1-like 457 562 - -
Lapu5g00034 810 ProSiteProfiles PAN/Apple domain profile. 325 406 IPR003609 -
Lapu5g00034 810 ProSiteProfiles Protein kinase domain profile. 488 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00034 810 CDD B_lectin 45 152 IPR001480 -
Lapu5g00034 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 769 - -
Lapu5g00034 810 ProSitePatterns Protein kinases ATP-binding region signature. 494 517 IPR017441 GO:0005524
Lapu5g00034 810 SMART blect_4 40 152 IPR001480 -
Lapu5g00034 810 Gene3D Phosphorylase Kinase; domain 1 455 562 - -
Lapu5g00034 810 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Lapu5g00034 810 SMART serkin_6 488 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00034 810 Pfam Protein kinase domain 491 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00034 810 Gene3D - 39 153 IPR036426 -
Lapu5g00034 810 Pfam D-mannose binding lectin 81 162 IPR001480 -
Lapu5g00034 810 Gene3D Transferase(Phosphotransferase) domain 1 563 761 - -
Lapu5g00034 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Lapu5g00034 810 PIRSF SRK 3 807 IPR024171 GO:0004674
Lapu5g00034 810 CDD STKc_IRAK 494 761 - -
Lapu5g00034 810 Coils Coil 810 810 - -
Lapu5g00034 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 203 IPR036426 -
Lapu5g00034 810 FunFam S-receptor-like kinase 5 563 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00034 Lapu-Chr5 333081 336168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00034 429 768 Receptor kinase-like Gene Family AT5G20050 44.847 6.08e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu5g00034 Pkinase 4.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00034 - - gmx:100786024 1469.91