Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu5g00016 | ATGTTTATTACGTTAAAGATCACGAAGATTCATTGCACTCTCATCCTGACTTGCTTTTTTTTTCCTGGTTTACAGGTTTGGGATGGAGAGAGGTTCTCTGACTGCTTTGAAGACATTGTTTTAGGTTTTGCAGTTAACATAGTAACTGTTGTTATGGTTGTTGTGCTTGCATTTAGACAGAAGATTGTTGGAGGAGTTCGGAGGTCAGATGGCCAGAGGACCCTTCCAGAAAAAGTTGTCCTGGATTTTATACCAGCTGTTGGAGCATGTCTTTCAATTGTAGACATATTTTTTCTGTGGAAGAAAGAGCATAGTAGTCACTTTGTTGGATATCATAAATGGTTATGTAGCTGTTCTGAGTTGATGGTGTGGATAAATATAATTTTCTTCACAAAGCGTGCCTGCAGTCGTCACATTGTCTTCAATCGTGTCTTTTGTTTCTGGTGGATTCCGAAAGCAATATTGGCAGTTTTATATTTGATGACAAAGATTTCATCATTGAAGGTTTCAATATGCATCACGGAAAGCTTAGTTGTTCTCTTGAATATCTCATTTGGCTTAGCCATCAATGTGATCAGGATAAAGAGACCATCTTACAAAAGCAGTTTATTATTGGAAGATCCACTTCTTTCGAATGGCGTGGACCTTGAGGAAGGTGGTTATCATGACCTTGGAAATGATGGAAACTTTTGGGATTTGATGACTTTCAAATTCATAACTCCAGTAATGAATCATGGTGTGGTAAAACAATTAGACTCTGATGACCTATTGCCACTACCTACTGATATGGATCCTTCTTCCTGTCATGATGTGATCTTATCCTGCTGGCAAGCTCAACTGAGTAACAATGGTTCAAAGCCATCTTTGTTTAGAGCACTTTGTAGTGCATATGGATGGCCATATCTCCGCCTGGGTTTATTGAAGGTGACTAATGATTGTATTGGTTTTGCGGGACCGTTGCTTCTCAATAAGCTGATCCAGTTTCTTCAACAAGGTTCAGTGAATTTGGATGGGTATTTACTTGCATTATCCTTGGGGCTTACCTCTATAATTAAATCCTTTTTAGATACACAATATACTTTTCATCTTTCCAAACTGAAGCTGAAGCTGCGATCTAGTATCATGACTCTAATCTATGAGAAGTGTCTGCGTGTGAACTTAGCAGAGCGTTCAAAGTTTACAAATGGAGAAATTCAGACATTTATGTCAGTGGATGCTGACCGAACTGTCAACTTGTGTAATAGTTTCCATGATATGTGGAGCCTGCCTCTACAAATTGGAGTGGCTCTCTATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATAACCATTTTATTGATACCAGTGAATAAATGGATATCACAATTGATTGCAACTGCAACTCAGCAGATGATGAAGGAGAAAGATGAAAGGATTCGTAGGACAGGAGAACTTTTGACTTATATTCGCACTTTGAAGATGTATGGATGGGAAATTCTTTTTTCTAGTTGGTTGATGGTTACAAGATCTAAGGAAGTCAAACACTTAGCTACTCGAAAGTACTTGGACGCATGGTGTGTTTTCTTTTGGGCTACAACACCAACACTCTTTTCTCTTTTCACATTTGGACTCTATGCACTGATGGGACATCAACTTGATGCTGCAATGGTTTTCACTTGTCTTGCTTTGTTCAACACCCTTATTTCACCACTAAATTCATTTCCTTGGGTAATTAATGGATTGATTGATGCCATCATATCCTCCAGACGGTTGAGTAGGTTTCTTGCTTGTCCTGAACATAAATTTAAAGTGGGAGACACTAGTTCTTGTCCATCATCATTCCTAAGTGAACAGCCTGATTCTGTACAAGGTTTGGGTGTATGTATCCAGGATGCATGCTGTACTTGGTCAAACAGTGAGGAACAAACATTAAATTTGGTGTTGAATCATGTGACTCTAAGTGTGTCCCAGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCGGGTAAATCATCCCTGTTATATTCAATTCTTGGAGAAATGCAGCTTGTTCGTGGCTCTATTTATTCCAATGAATCCATTGCTTATGTACCACAGGTCCCTTGGATTTTATCTGGAACAGTACGTGACAACATATTATTTGGGAAAAGCTATGATCCCGAAAGGTATACTGATACACTGAAGGCATGTGCATTAGATGTTGATGTCTCATTGATGATTGGAGGTGACATGGCTTATATTGGAGAGAAAGGAGTCAACTTATCGGGTGGACAGAGAGCTCGTCTTGCTTTGGCGAGGGCATTGTATAATGACTCAGCTGTTGTTATGCTTGACGATGTCCTGAGTGCAGTAGATGTACAAGTTGCTCAATGTATCTTATACAATGCCATTCTAGGCCCCCTTATGCAGACAAAAACTCGATTGCTATGTACCCATAACATTCAGGCAATATCTTCCGCTGATAAGATTGTTGTAATGGACAAGGGACACATAAAGTGGATGGGAAATTCAGATGACTTTCCAATTAATTCATGTGCTGATTTCTCTCCGTTGAATGAAATTGATTCAGCTTTTCAGAATCATAGACAATCTTGCAGCCCAAATCTTGCTTCCAAATCCAAGGAGCAGTCTTTTCTTGGTACAGGTATTGTGCATGCTCTGGAGGGAGCAGAGGAGATAGTTGAAGTTGAGTTGAGGAAAGAGGGAAAAGTTGAAATTGGAGTGTATAAGAATTATGCTGTCTTCACTGGCTGGTTCATGACTCTCATTATATGCCTATCAGCTATTCTGATGCAAGCTTCTCGTAATGGGAATGATTTATGGCTATCATATTGGGTTGATACAGCAACAGAAAGCAGTCAGACAAGATATTCTGTGTCTTTCTATCTGGCTATACTATGTTTCTTTTGTATTGTTAATTCCTTTTTCACATTGGTGAGGGCATTCTCTTTTGCATTTGGTGGATTACAAGCTGCAACTAAGATACACAATAAATTGCTCAACAAGCTTATCAATGCACCTGTCCAATTCTTTGATCAGACCCCTAGTGGGAGAATACTGAACAGGTTATCTTCAGATCTTTATACCATTGATGATTCACTTCCATTCATTATGAACATTCTCCTAGCTAATTTTGTAGGCTTGTTGGGTATTACAATAATTTTGTGTTACGTACAGGTCTTCTTCTTACTCTTGCTATTACCATTTTGGTATATCTACAGTAGACTTCAGTTCTTCTACAGGTCAACATCAAGAGAATTACGAAGACTGGACAGTGTTTCTCGTTCTCCAATATACTCATCTTTCACTGAAACACTTGATGGATCATCAACTATTAGGGCGTTTAAATCTGAGGACTTTTTCTTTACCAAATTCACTGAACATGTAACCTTGTATCAGAAGACTTCCTACACAGAGATAGTGGCAAGTTTGTGGCTTTCCTTGCGTCTTCAGTTATTAGGTGCATCTATCATCTCCTTCATAGCTGTGATGGCTGTTGTTGGATCTCATGGCAGTCTGCCCATCAACTTTGGTACTCCAGGACTGGTTGGATTGGCCCTCTCATATGCAGCTCCAATTGTGTCCCTGTTGGGGAGTTTTTTATCAAGCTTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAACCCTTCAATACATGGACATTAGTCAAGAAGAAGAAACTGGATGCCTATACATGAATCCAGATTGGCCAAATGAAGGATTTATCGAATTTCAGCGTGTTACTTTGAAATATATACCATCTCTGCCAGCTGCACTCTGCAATCTTAGTTTTGGAATTGCTGGAGGGACACAAGTTGGAATAATTGGAAGAACGGGTGCTGGAAAGTCCAGTGTGTTAAATGCCCTTTTCCGTCTTACCCCAATATGTACAGGCTCTATCTCAATTGATGGCGTGGATATTAAAAATATTCCTGTCAGAGAACTACGTGCACATTTGGCCATTGTTCCTCAGAGTCCATTTTTGTTCGAAGGATCATTAAGGGATAACCTAGATCCTTTCAAAACGAATGATGACTTAAAAATTTGGAATGCATTGGAAAAGTGCCACGTGAAAGAGGAAGTAGAAGTAGCTGGAGGGCTGGACCTTCTTGTAAAGGAAGGAGGGATGTCTTTTTCAGTTGGCCAGCGACAACTTCTTTGCCTCGCACGTGCACTTCTGAAATCTTCCAAGGTTCTCTGTTTGGATGAATGCACAGCCAATGTAGACATTCAAACTGCTTCACTGCTGCAAACTACCATATCCCGTGAATGTAAAGGAATGACAGTTCTCACAATTGCTCACCGGATTTCGACTGTTATAAATATGGACAACATTCTGATTCTCGACCATGGGAAATTGGCTGAACAGGGTAACCCGCAGGTTCTTCTGAAAGATGACACCTCGATATTTTCTAGTTTTGTTAGAGCTTCATCAATGTAG | 4443 | 0.3966 | MFITLKITKIHCTLILTCFFFPGLQVWDGERFSDCFEDIVLGFAVNIVTVVMVVVLAFRQKIVGGVRRSDGQRTLPEKVVLDFIPAVGACLSIVDIFFLWKKEHSSHFVGYHKWLCSCSELMVWINIIFFTKRACSRHIVFNRVFCFWWIPKAILAVLYLMTKISSLKVSICITESLVVLLNISFGLAINVIRIKRPSYKSSLLLEDPLLSNGVDLEEGGYHDLGNDGNFWDLMTFKFITPVMNHGVVKQLDSDDLLPLPTDMDPSSCHDVILSCWQAQLSNNGSKPSLFRALCSAYGWPYLRLGLLKVTNDCIGFAGPLLLNKLIQFLQQGSVNLDGYLLALSLGLTSIIKSFLDTQYTFHLSKLKLKLRSSIMTLIYEKCLRVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDMWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISQLIATATQQMMKEKDERIRRTGELLTYIRTLKMYGWEILFSSWLMVTRSKEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAIISSRRLSRFLACPEHKFKVGDTSSCPSSFLSEQPDSVQGLGVCIQDACCTWSNSEEQTLNLVLNHVTLSVSQGSFVAVIGEVGSGKSSLLYSILGEMQLVRGSIYSNESIAYVPQVPWILSGTVRDNILFGKSYDPERYTDTLKACALDVDVSLMIGGDMAYIGEKGVNLSGGQRARLALARALYNDSAVVMLDDVLSAVDVQVAQCILYNAILGPLMQTKTRLLCTHNIQAISSADKIVVMDKGHIKWMGNSDDFPINSCADFSPLNEIDSAFQNHRQSCSPNLASKSKEQSFLGTGIVHALEGAEEIVEVELRKEGKVEIGVYKNYAVFTGWFMTLIICLSAILMQASRNGNDLWLSYWVDTATESSQTRYSVSFYLAILCFFCIVNSFFTLVRAFSFAFGGLQAATKIHNKLLNKLINAPVQFFDQTPSGRILNRLSSDLYTIDDSLPFIMNILLANFVGLLGITIILCYVQVFFLLLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYSSFTETLDGSSTIRAFKSEDFFFTKFTEHVTLYQKTSYTEIVASLWLSLRLQLLGASIISFIAVMAVVGSHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLSSFTETEKEMVSVERTLQYMDISQEEETGCLYMNPDWPNEGFIEFQRVTLKYIPSLPAALCNLSFGIAGGTQVGIIGRTGAGKSSVLNALFRLTPICTGSISIDGVDIKNIPVRELRAHLAIVPQSPFLFEGSLRDNLDPFKTNDDLKIWNALEKCHVKEEVEVAGGLDLLVKEGGMSFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLQTTISRECKGMTVLTIAHRISTVINMDNILILDHGKLAEQGNPQVLLKDDTSIFSSFVRASSM* | 1481 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu5g00016 | 1480 | FunFam | ATP-binding cassette (ABC) transporter, putative | 1230 | 1477 | - | - | |
Lapu5g00016 | 1480 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 625 | 852 | IPR003439 | GO:0005524 | |
Lapu5g00016 | 1480 | Pfam | ABC transporter transmembrane region | 921 | 1170 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lapu5g00016 | 1480 | Pfam | ABC transporter transmembrane region | 305 | 569 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lapu5g00016 | 1480 | FunFam | ABC transporter C family member 13 | 608 | 862 | - | - | |
Lapu5g00016 | 1480 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 632 | 839 | IPR027417 | - | |
Lapu5g00016 | 1480 | ProSitePatterns | ABC transporters family signature. | 753 | 767 | IPR017871 | GO:0005524|GO:0016887 | |
Lapu5g00016 | 1480 | CDD | ABCC_MRP_domain2 | 1241 | 1460 | - | - | |
Lapu5g00016 | 1480 | Pfam | ABC transporter | 646 | 778 | IPR003439 | GO:0005524 | |
Lapu5g00016 | 1480 | CDD | ABCC_MRP_domain1 | 625 | 828 | - | - | |
Lapu5g00016 | 1480 | Gene3D | - | 620 | 856 | IPR027417 | - | |
Lapu5g00016 | 1480 | Pfam | ABC transporter | 1261 | 1407 | IPR003439 | GO:0005524 | |
Lapu5g00016 | 1480 | SUPERFAMILY | ABC transporter transmembrane region | 917 | 1227 | IPR036640 | GO:0005524|GO:0016020 | |
Lapu5g00016 | 1480 | Gene3D | - | 1228 | 1477 | IPR027417 | - | |
Lapu5g00016 | 1480 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 306 | 581 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lapu5g00016 | 1480 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 229 | 1477 | - | - | |
Lapu5g00016 | 1480 | FunFam | ABC transporter C family member 5 | 885 | 1226 | - | - | |
Lapu5g00016 | 1480 | SUPERFAMILY | ABC transporter transmembrane region | 290 | 589 | IPR036640 | GO:0005524|GO:0016020 | |
Lapu5g00016 | 1480 | ProSitePatterns | ABC transporters family signature. | 1379 | 1393 | IPR017871 | GO:0005524|GO:0016887 | |
Lapu5g00016 | 1480 | SMART | AAA_5 | 1269 | 1447 | IPR003593 | GO:0016887 | |
Lapu5g00016 | 1480 | SMART | AAA_5 | 655 | 829 | IPR003593 | GO:0016887 | |
Lapu5g00016 | 1480 | FunFam | Multidrug resistance-associated protein ABC domain protein | 280 | 598 | - | - | |
Lapu5g00016 | 1480 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1237 | 1468 | IPR027417 | - | |
Lapu5g00016 | 1480 | Gene3D | ABC transporter type 1, transmembrane domain | 278 | 599 | IPR036640 | GO:0005524|GO:0016020 | |
Lapu5g00016 | 1480 | Gene3D | ABC transporter type 1, transmembrane domain | 889 | 1227 | IPR036640 | GO:0005524|GO:0016020 | |
Lapu5g00016 | 1480 | CDD | ABC_6TM_MRP7_D2_like | 920 | 1220 | - | - | |
Lapu5g00016 | 1480 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 921 | 1208 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lapu5g00016 | 1480 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1243 | 1476 | IPR003439 | GO:0005524 | |
Lapu5g00016 | 1480 | CDD | ABC_6TM_MRP7_D1_like | 304 | 589 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu5g00016 | Lapu-Chr5 | 224714 | 239390 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu5g00016 | 645 | 872 | Calmodulin-binding Proteins | AT2G36910 | 28.000 | 5.78e-18 | 88.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu5g00016 | K05674 | - | gmx:100814181 | 2537.3 |