Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01529 ATGGCTCTATGGCTTGGCTATGCAGCAGCAACAATTGTAGCACTCTTCTGCATCATGTACTTCTTCCATAGGAGACTATGTTGCAGATACCCCCTCTTGACAGACTACCCCATCCTTGGCATGCTACCACAGGTACTCTGCAATTTGTGGCGTGGCCATGATTTTTTCACTGAGGTTTTGAAGCAGAATGGGAGAACCGGTGAGTTCACTGGACCATGGTTTACCAACATGAACTATTTGGTCACTGGTGACCCCCTCAACGTGCACCACATCATGAGCAAGAGCTTTCACAATTACGTCAAGGGACCCGTGTTTCGTGACATTTTTCAAGCCTTCGGAGATGGGATTTTCACCGCTGATTCAGAAACATGGAAATACAACAGGGATCTCTTTCATTCTCTCTTTAAACAGAAAAGCTTTGAGGTGTTTCTGGCGGAAACAATTCACAAGAAGGTGCAGAAGAGCCTACTTCCCATATTGGATCATCTGCACCAACAAGGGAGCGTGGTGGATCTTCAAGATGTCTTCAACCGCTTCACTTTTGATAACATATGTTCTATAGTTCTTGGCAATGACCCTAGTTGCCTTTCCGTTGATTTTCCCGAAGTTGCAATCGAGAAGGCTTTTAATGAAGCGGAAGAGGCCATATTCCACAGACATGTAGTGCCAAGGTGTGTTTGGAAGCTGCAGAAATGGCTTCAGATTGGTCAAGAGAAGAAGATGAAAGAAGCATGTAAAACACTTGATGAGTTTATATACGCATGCATAGCGTCTAAGAGAGAAGATCTAAGCAAGCACAAAGAAAATGAAACGGGAGAAACTTTTCATGTTGACTTGTTAACAACTTTGATGAGAGAAGGAGAAGGAAAAGGACAAACACATGAGGACATATTTCTAAGAGATGCTGTGTTCAATCTTTTTGTGGCTGGAAGAGATACCATAACTTCAGCTCTCACGTGGTTCTTTTGGCTTGTTGCTACAAACCCTTCGGTGGAAGCCAAGATTCTTCAAGAGATCAACGAAAAGTTTGGAAGCAATGAAAAAGCTCTAGAGGTTTTAAGTGTGGAGGAGGTGAAAAAGCTGGTTTATCTGCATGGTGCTATATGTGAAGCACTGAGGCTCTTTCCTCCCATACCCTTCGAACGCAAACAAGCACTTGAAGCTGACATGCTTCCTAGTGGTCATGGTGTTAATCCCAGTAAAATTATATTATTTTCTTTGTATGCAATGGGAAGATTTGAGGAAATATGGGGAGAAGATTGTATGGAGTTCAAGCCAGAGAGATGGATCTCACAGAGAGGAGGTAATGTCTGTGTACCATCTTACAAATTCATAGCTTTTAATGCAGGACCTAGAACTTGCTTGGGCAAAGACTCCTCCTTCATTCAAATGAAGATGGTGGCAACTGCAATTTTGCACAAGTATCGTGTCCAAGTGGTGGAAGGGTATGTTGCTAGGCCAAACCTTTCAATCGTTCTTCTAGTGAAGGATGGTTTAAAGGTTCAGATAAAAAAAAGAGAAATTTAG 1527 0.4257 MALWLGYAAATIVALFCIMYFFHRRLCCRYPLLTDYPILGMLPQVLCNLWRGHDFFTEVLKQNGRTGEFTGPWFTNMNYLVTGDPLNVHHIMSKSFHNYVKGPVFRDIFQAFGDGIFTADSETWKYNRDLFHSLFKQKSFEVFLAETIHKKVQKSLLPILDHLHQQGSVVDLQDVFNRFTFDNICSIVLGNDPSCLSVDFPEVAIEKAFNEAEEAIFHRHVVPRCVWKLQKWLQIGQEKKMKEACKTLDEFIYACIASKREDLSKHKENETGETFHVDLLTTLMREGEGKGQTHEDIFLRDAVFNLFVAGRDTITSALTWFFWLVATNPSVEAKILQEINEKFGSNEKALEVLSVEEVKKLVYLHGAICEALRLFPPIPFERKQALEADMLPSGHGVNPSKIILFSLYAMGRFEEIWGEDCMEFKPERWISQRGGNVCVPSYKFIAFNAGPRTCLGKDSSFIQMKMVATAILHKYRVQVVEGYVARPNLSIVLLVKDGLKVQIKKREI* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01529 508 CDD CYP86A 68 499 - -
Lapu4g01529 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Lapu4g01529 508 Pfam Cytochrome P450 42 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 Gene3D Cytochrome P450 23 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 PANTHER CYTOCHROME P450 24 499 - -
Lapu4g01529 508 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01529 508 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01529 Lapu-Chr4 32449408 32451264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01529 13 506 Cytochrome P450 AT4G39490 47.173 3.94e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01529 - - gmx:100792360 850.892