Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01528 ATGCACAAACACTATCTAATTTTCGATATGGCCTTGTTTCTTCTCTATGCAGCCATAATGGCATCATTCCTCTGCTCCCTATACTTCTTCCATCGCAGAAGATGTTGCATACAGCCCCTCTTGACAGATTACTTCATCCTTGGCATGCTACCACCAGTGCTCTTCAACCTGTGGAGGATCCATGATTTTATTACTGAGATTCTGAAACTATGTGGTGGCACTGGGGAGTTCAAGGGACCATGGTTCACCAAAATGAACTATTTGATCACTTGTGACTCGCTCAATGTGCAACACATGCTGTGCAAGCGCTTTGACAACTACATCAAGGGACCCGAGTTTCGTGAGATTTTCGAACCCTTTGGAAATGGGGTTGTCACTGCCGATTCAGAAACATGGAAGTACTTCAGAACCATTCTCCATTCTTTGATCAAACAAAGAAGATTTGAAGCATTTGTTGATCAAACCGTTCAGAAGAAGGTGTATACAAGCCTGCTTCCGATATTGGATCATGCACAAAAAGAAGGAAGACTGGTGGATCTTCAAGATATCTTCAATCGATTCACATTTGACAACATATGCTCCACAATTGTAGGACATGATCCTAAGTGTCTTTCCGTTGACTTTCCCGAAGTTGCAATCGAAAAGGCTTTTAATGAGTCTGAAGAGTCGATATTCTACAGACACATAGTGCCAAGAAGTGTTTGGAAGTTCCAAAAATGGCTCCAAATTGGTCAAGAGAAGAAAATGACAGAAGCCTGCAGAACGTTTGATGAGTTCATATATTCATGCATAGCGTCCAAGCGAGAAGAGTTAAGTAAGTGCAGCAGAGAAGAAATGGATGAAGCTCCATTCGACTTGCTAACTGCTTTAATCACAGAAGAGAGAGGATGCGTGCATGATGATAAGTTTCTAAGAGATGCTGCCTTTAACTTCTTTGTAGCGGGGAGAGAAACCATGACTTCAGCTCTCACATGGTTCTTCTGGCTTATTGCTAACCACCCTTTAGTGGAAGCCAAGATTCTTGAAGAGATCAAAGATAATTTTAAGACAAAGGAAAAGAAAAGCTATCACGAGGTCCATGATCGGAGTTGTGATGGTTTTGATGAGGAGCATCATAATCTTGACGAGGAACATCTCAACCAACATGCATCTGAGGAAGTTTTAGGCATGGAGGAGGCGAAAAAGCTAGTTTATCTGCATGGTGCTTTGTGTGAAGCTCTAAGACTTTTCCCTCCAGTGCCTATTGAACGAAAGCAAGCAGTTAAAGATGACACACTTCCAAGTGGGCACAGAGTAAATGCTAATACAATGATAATGTTTTCTTTGTATGCAATGGGGAGGAGTGAAGAGATATGGGGAAAAGATTACTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGTGAAATTGTTTATGCAGCAGCATACAAATTCATTGCTTTTAATGCAGGACCAAGAATCTGTCTGGGAAAGGACCTGGCCTTTGTTCAAATGAAGATGGTGGCGGCTGCTATTTTGCACAGGTACCGGTTCCAAGTTGTGGAAGGTCATGTTGCAACTCCAAACCATTCAATTATTCTTCTCATGAAGAATGGTTTGAAGGCTAGGATAATGAAAAGAGAAGTTTGA 1632 0.4179 MHKHYLIFDMALFLLYAAIMASFLCSLYFFHRRRCCIQPLLTDYFILGMLPPVLFNLWRIHDFITEILKLCGGTGEFKGPWFTKMNYLITCDSLNVQHMLCKRFDNYIKGPEFREIFEPFGNGVVTADSETWKYFRTILHSLIKQRRFEAFVDQTVQKKVYTSLLPILDHAQKEGRLVDLQDIFNRFTFDNICSTIVGHDPKCLSVDFPEVAIEKAFNESEESIFYRHIVPRSVWKFQKWLQIGQEKKMTEACRTFDEFIYSCIASKREELSKCSREEMDEAPFDLLTALITEERGCVHDDKFLRDAAFNFFVAGRETMTSALTWFFWLIANHPLVEAKILEEIKDNFKTKEKKSYHEVHDRSCDGFDEEHHNLDEEHLNQHASEEVLGMEEAKKLVYLHGALCEALRLFPPVPIERKQAVKDDTLPSGHRVNANTMIMFSLYAMGRSEEIWGKDYLEFKPERWISERGEIVYAAAYKFIAFNAGPRICLGKDLAFVQMKMVAAAILHRYRFQVVEGHVATPNHSIILLMKNGLKARIMKREV* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01528 543 CDD CYP86A 76 534 - -
Lapu4g01528 543 Pfam Cytochrome P450 74 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 Pfam Cytochrome P450 384 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 PRINTS P450 superfamily signature 480 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 PRINTS P450 superfamily signature 489 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 Gene3D Cytochrome P450 31 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 PRINTS E-class P450 group I signature 489 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 PRINTS E-class P450 group I signature 479 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01528 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 482 491 IPR017972 GO:0005506|GO:0016705
Lapu4g01528 543 PANTHER CYTOCHROME P450 30 534 - -
Lapu4g01528 543 SUPERFAMILY Cytochrome P450 28 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01528 Lapu-Chr4 32436123 32438035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01528 10 542 Cytochrome P450 AT2G23180 42.096 6.01e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01528 - - gmx:100780625 892.108