Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01526 ATGGAAGAAAAGGTTGTGGAAAGTCTTTGGAATGGCGATGCAGAATCTCAAATTCAAGCAGCTTTGGAACTTTGTAGATTGAGCAGAAAGCAGAGACACAAGTTAGAAGAAAGTAGAGTCATGGTTCCTCTTATTTCCATGCTTCATTCTGAAAACTATGAAGCAATAGAAGCTGCTCTGTGTGCTTTACTCAGTCTTTCCTTTGGCTGTGAGAGAAACAAGATTCGGATCATCAAATCTGGAGCTTTGCCAGTTCTGTTGAGTCTCCTGCATTGTGATAGCGAGAGAGCGGCACAATTGACTTTGGCAGCCATGCTAACTCTCTCTTCTTGCAAAGCAAATAAGGTCGCAATTGCCTCTTCTGGGGCTGTTCAACTCTTGGCTGAGTTTGTCAACAGCAATTGTAGCACTCAGTCTCAGCTTGATGCTATAGCTACTCTACACAACCTCACAACCTGCCAAGAGATTATTCCACTGATTGTCTCTTCTGGGGTTATGCTCTCATTGCTTGAACTGATCCACACCTCAGTAAAATCATCTCCATTGGTTGAGAAAGCAATTGGGTTGCTAGAAAACCTCGTGTCTTCATCAGAGAGTGCACTGTGTGAGGCTGCTGGTGCTATGGGAGCAATCAGGATACTGGTTGAGACTATTGAAGATGGATCTTCACTGAGCAAAGAGCATGCAGTGTGTATACTTCTCCTTGTATGCCAGAGCTGCAGAGAGAAATATAGAGGGTTGATTTTGACAGAGGGGGTGATGCCAGGGTTGCTTCAGTTAAGTGTGGATGGAACATGGAAAGCCAAATCCATGGCTCGAGAACTGTTGTTGCTTCTGAGGGAGTGCTCCAATTATGGCTCAAGATGTAAACAGATTAACCATGAGCTTATAGAAAGGATAATGGATGAAATTGAAGCAGAAGGAGAGACATTGGCAGATACTACTTTAAGGCTGGTAGAGGAAATGATTGCAAAGCTCCATGCTTAA 987 0.4367 MEEKVVESLWNGDAESQIQAALELCRLSRKQRHKLEESRVMVPLISMLHSENYEAIEAALCALLSLSFGCERNKIRIIKSGALPVLLSLLHCDSERAAQLTLAAMLTLSSCKANKVAIASSGAVQLLAEFVNSNCSTQSQLDAIATLHNLTTCQEIIPLIVSSGVMLSLLELIHTSVKSSPLVEKAIGLLENLVSSSESALCEAAGAMGAIRILVETIEDGSSLSKEHAVCILLLVCQSCREKYRGLILTEGVMPGLLQLSVDGTWKAKSMARELLLLLRECSNYGSRCKQINHELIERIMDEIEAEGETLADTTLRLVEEMIAKLHA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01526 328 FunFam U-box domain-containing protein 4 3 197 - -
Lapu4g01526 328 Gene3D - 3 327 IPR011989 -
Lapu4g01526 328 SMART arm_5 111 152 IPR000225 GO:0005515
Lapu4g01526 328 SMART arm_5 28 68 IPR000225 GO:0005515
Lapu4g01526 328 SMART arm_5 70 110 IPR000225 GO:0005515
Lapu4g01526 328 SMART arm_5 197 238 IPR000225 GO:0005515
Lapu4g01526 328 SMART arm_5 153 195 IPR000225 GO:0005515
Lapu4g01526 328 PANTHER U BOX DOMAIN-CONTAINING 3 282 - -
Lapu4g01526 328 FunFam U-box domain-containing protein 4 201 317 - -
Lapu4g01526 328 SUPERFAMILY ARM repeat 4 305 IPR016024 -
Lapu4g01526 328 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 199 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01526 Lapu-Chr4 32423230 32424730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01526 4 280 U-box Gene Family AT3G54790 33.451 8.53e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01526 - - gmx:100778534 548.895