Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01484 ATGCCTGGAGGGAGCAGCAAAAGGAGGATACATTTTAGCAAACTGTACAGTTTTTCTTGTTTGAAATCTCCTTTCAGAGATGGTCATTCGCAAATTGGGCAGAAGGGCTACTCAAGGGTTGTGTACTGCAATGATCCGGATAACCCTGAAGCAGTTCAGTTGAATTATGGAGGCAATTATGTTTCAACAACCAAGTATACAGCTTTTAATTTTATCCCCAAGTCTTTGTTTGAGCAGTTCAGGAGGGTTGCAAATATCTACTTTCTCATTGTTGCGTGTGTTTCATTTAGTCCATTGACACCTTTTACTGCTCTAAGTATTGTTGCTCCATTGCTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCCGTGGAAGATTGGAGGAGGAGAAAACAGGATGTAGAGGCAAACAACAGAAAGGTTCAGGTATATGGTAGAAATTATACATTTACGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATATCATCAAAGTGTACAAAGATGAATACTTTCCTGCTGATCTTCTTTTGCTTTCATCAAGCTATGGTGATGGGGTTTGTTATGTTGAGACTATGAATCTGGACGGAGAAACTAATCTAAAATTAAAGCAAGCGTTGGAGGTGACAATTCATCTTCATGATGAAAAATCTCTCCAAAAGTTTAGAGCTGTGGTTAAATGTGAGGATCCAAACGAAAATCTGTACTCATTTATTGGAACTTTACAACATGATGGTAAAGAGTATCCTCTTTCGTTGCAGCAGATCCTGTTAAGAGATTCAAAGTTGAAAAACACTGATTTTATCTATGGCATTGTTATCTTTACTGGCCATGATACGAAAGTTATGCAGAATTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGGAAAATGGATAAGATAATCTACATCCTCTTCAGTACCTTGGTTTTAATATCCTTTATTGGTTCTGTCTTTTTTGGTATTGAGACCAAAAAGGATATTAGTGGTAGAAGGTATAGAAGATGGTATCTTCGTCCAGAAAATGCAACGGTTTTCTATGATCCCAGAAGGGCAACACTTGCTGCTGTTCTTCATTTTTTGACTGCCATTATGTTGTATGGATATCTAATTCCGATATCACTTTATGTGTCCATAGAAATTGTGAAAGTTCTGCAGAGCATTTTCATTAACCAAGACCAAGAAATGTATTATGAAGAATCAGATAGGCCAGCTCATGCACGGACTTCTAATTTGAATGAGGAACTTGGTCAGGTTGATACAATATTGAGTGACAAAACTGGTACTTTGACATGTAACTCAATGGAATTTGTCAAATGTTCAATAGGGGGCATTCCATATGGTCGTGGTATGACGGAAGTAGAGAAGGCACTTGCCAGGAGAGGAAAAGGTGGGGAATCTGATATTGATGGTGGATCATCTGATTTCTTGGGCCAGAATAATGAGGCAGTGGACTCTCTGCATCCAATTAAGGGCTTTAACTTCAGAGATGAGCGCATAGTGAATGGGAAATGGGTTAATGAACCATATCCAGACTTCATACAGAAATTCTTTCGAGTTTTAGCTATTTGTCACACAGCTATTCCAGATGAAGATAAAGAGTTCGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAATCAGCTTTTCTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTGCAAGGACACAAACAAGCATATCATTGCACGAATTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTGAGGAATGAGGAAAATCAATTATTGCTTCTATGCAAGGGTGCAGACAGTGTAATGTTTGAAAGGCTCTCACAACATGGAAGACAGTTTGAGGCTGAAACCAGGGATCATATCAAAAGATATGCCGAAGCTGGTTTAAGAACCCTTGTAGTCACATACCGTGAACTTGATGAAGAAGAATATAAGTTATGGGACAAGGAGTTTTCAAAGGTTAAAACTTCTGTAACAGAAGACCGAGATGCACTGGTGGATGCAGCTGCTGATAAGATGGAAAGAGATTTGATACTTCTTGGTGCTACGGCAGTTGAGGATAGACTGCAAAAGGGGGTTCCTGAGTGTATTGAAAAGCTTGCACGGGCAAAAATCAAGTTATGGGTATTGACTGGAGACAAGATGGAAACTGCAGTCAACATAGGGTATGCTTGTAGTTTACTTAGACAAGACATGAAACAAATAGTGATCACTCTTGATTCCTCAGATATCCTATACTTGGAAAAACAAGGAGACAAGCAGGCTCTAGCAAAGGCTTCTCTTGAAAGCATTAAGAAGCAAATTGGAGAAGGAATCTCCCAAATCAACTCTGCCAAAGAGAGTTCTATTACAGACAATGAAAGTTCTTCTGGGTTTGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAATTTGGAAAGGTCCTTCTTTGAGCTAGCCATTAATTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAACAAAAAGCTCGTGTTACAAGATTGGTAAAATTGGGAACGGGGAAGACAATATTATCTATTGGTGATGGGGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCAATAGCTCAATTCCGGTTTCTGGAGCGTTTGTTGTTGGTACATGGCCATTGGTGTTATCGGCGTATATCGATGATGATATGCTATTTTTTCTATAAAAACATTGCATTTGGATTTACCCTTTTTTGGTTTGAGGCATATGCTTCTTTCTCTGGTCAAGCTGCTTACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTAATCGCTCTAGGTGTTTTTGATCAGGACGTTTCCGCCAAACTTTGCCTAAAGTATCCCTTTCTATATCTAGAGGGAGTAGAAGACACCCTCTTCAGCTGGCCTCGGATTCTTGGCTGGATGTTGAATGGAGTCCTTAGTTCTTTGGTGATCTTCTTCTTAACTACTAATTCTGTCTTGAATCAGGCCTTCAGAAGAGATGGTAAGGTGGTTGATTTTGAAATACTTGGGGTCACAATGTATACATGTGTGGTGTGGACTGTGAATTGCCAAATGGCACTATCCATCAACTACTTTACTTGGATACAACATTTTTTTATATGGGGCAGCATCGCCTTCTGGTATGTATTTGTGTTGGTCTATGGTTACCTCTCTCCAGCAATATCCACAACAGCTTACAGGGTTTTTGTGGAAGCATGTGCTCCCAGTGGTCTATATTGGCTAGTTACCCTTTTGGTTGTTGTGTGTGTGCTGCTACCCTATTTCTCTTATAGGTCTTTCCAAAGTCGGTTTCTACCAATGTACCATGATATTATACAGAGAGAACAAGTAGAAGGGTTTGAAATTGGCTTATCTGATGATGAGTTACCTAAACAAGTCCAGGGAAAACTAATACACCTGAGAGAGAGATTGAAGCAAAGGGAGTTGTGA 3588 0.3994 MPGGSSKRRIHFSKLYSFSCLKSPFRDGHSQIGQKGYSRVVYCNDPDNPEAVQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACVSFSPLTPFTALSIVAPLLVVIGATMAKEAVEDWRRRKQDVEANNRKVQVYGRNYTFTETRWKKLRVGDIIKVYKDEYFPADLLLLSSSYGDGVCYVETMNLDGETNLKLKQALEVTIHLHDEKSLQKFRAVVKCEDPNENLYSFIGTLQHDGKEYPLSLQQILLRDSKLKNTDFIYGIVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLVLISFIGSVFFGIETKKDISGRRYRRWYLRPENATVFYDPRRATLAAVLHFLTAIMLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEESDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKGGESDIDGGSSDFLGQNNEAVDSLHPIKGFNFRDERIVNGKWVNEPYPDFIQKFFRVLAICHTAIPDEDKEFGEISYEAESPDESAFLIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRKRMSVIVRNEENQLLLLCKGADSVMFERLSQHGRQFEAETRDHIKRYAEAGLRTLVVTYRELDEEEYKLWDKEFSKVKTSVTEDRDALVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLARAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSSDILYLEKQGDKQALAKASLESIKKQIGEGISQINSAKESSITDNESSSGFGLIIDGKSLDYSLNKNLERSFFELAINCASVICCRSSPKQKARVTRLVKLGTGKTILSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPFLYLEGVEDTLFSWPRILGWMLNGVLSSLVIFFLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRFLPMYHDIIQREQVEGFEIGLSDDELPKQVQGKLIHLRERLKQREL* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01484 1195 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Lapu4g01484 1195 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Lapu4g01484 1195 NCBIfam HAD-IC family P-type ATPase 842 957 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu4g01484 1195 Coils Coil 117 137 - -
Lapu4g01484 1195 SFLD p-type atpase 407 925 IPR044492 -
Lapu4g01484 1195 CDD P-type_ATPase_APLT_Dnf-like 58 1034 - -
Lapu4g01484 1195 Gene3D - 112 288 - -
Lapu4g01484 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1162 - -
Lapu4g01484 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 902 1152 IPR032630 -
Lapu4g01484 1195 FunFam Phospholipid-transporting ATPase 702 914 - -
Lapu4g01484 1195 Pfam E1-E2 ATPase 137 331 - -
Lapu4g01484 1195 SUPERFAMILY HAD-like 420 929 IPR036412 -
Lapu4g01484 1195 SUPERFAMILY Calcium ATPase, transduction domain A 144 285 IPR008250 -
Lapu4g01484 1195 FunFam Phospholipid-transporting ATPase 545 703 - -
Lapu4g01484 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 432 668 IPR023299 GO:0000166
Lapu4g01484 1195 FunFam Phospholipid-transporting ATPase 117 287 - -
Lapu4g01484 1195 Pfam Phospholipid-translocating ATPase N-terminal 41 105 IPR032631 -
Lapu4g01484 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Lapu4g01484 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 1151 IPR023298 -
Lapu4g01484 1195 Pfam Cation transport ATPase (P-type) 543 631 - -
Lapu4g01484 1195 NCBIfam phospholipid-translocating P-type ATPase 56 1160 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lapu4g01484 1195 SFLD Haloacid Dehalogenase 407 925 - -
Lapu4g01484 1195 Gene3D - 703 914 IPR023214 -
Lapu4g01484 1195 Gene3D - 572 702 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01484 Lapu-Chr4 31968885 31980056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01484 1 1165 Primary Pumps ATPases AT1G68710 64.030 0.0 1603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01484 K01530 - gmx:100817020 2217.96