Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01478 ATGAATTGTGGGAATCTGATTTATGCACTTGGGTGGTTAAATCTGTGTGTGGCATGTACATTCATTCAAGTCTCATTTGGGAAAGCCTCCAATTTCAGCAGATGTTGGTTCCCAGCAATTTACAACTTTGGGGACTCAAATTCAGACACAGGAGCTGTTTCTGCAGCATTCACAGGGGTGAAGCCTCCCAATGGCATAAGCTTCTTTGGAAGCCTCTCAGGAAGGGCTTCTGATGGCCGTCTCATTATTGATTATATGACTGAAGAGTTGAAGCTGCCATACCTCAGTGCATATTTGGACTCAGTTGGATCCAATTACAGGCATGGTGCAAACTTTGCAGTAGGAGGCTCCTCCATTCGGCCTGGTGGTTATAGTCCATTCCCTCTTGGTCTTCAAGTAGATCAGTTTCTACAGTTCAAGTCTCGCACCAACATTCTCTACAATCAGCTTTCTGACAATAGTTGCCATACATTCACCTTAATGTTTCTGACCTTCAAAAGTAGTCTTCCAAGGCCTGAGGACTTTTCAAGGGCCCTATACACCTTTGATATTGGACAAAATGATCTTGCCTTTGGTCTTCAGCACACTTCACAGGAACAAGTTATTAAGTCAATTCCTGACATTTTGAGCCAGTTCTTCCAAGCAGTGCAGCAACTATACTACCAAGGGGCAAGAGTGTTCTGGATTCATAACACTGGTCCAATTGGATGCTTGCCCTACAGTTACATTTATTATGGGCCCAAGAAGGGTAACATAGATGCAAATGGCTGTGTGAAACCTCATAATGAGCTTGCTCAGGAATTTAACAGGCAGCTCAAGGACCAAGTGTTTCAGCTAAGGAGAAAGTTCTCACTTGCCAAATTTACGTACGTTGATCTTTACACTGCTAAATACGAACTAGTCAGCAGTGCAAAGAGCCAAGGTTTTATTAGTCCATTGGAGTTCTGTTGTGGCAGTTACTATGGCTACCACATAAATTGTGGGAAGAAAGCCATAGTAAATGGAACAGTATATGGCAATCCATGCAAAAATCCTTTTCAACATGTTAGTTGGGATGGCATACACTACTCTCAAGCAGCAAACCAATGGATTGCTCAGAGAATTCTCTATGGCTCATTCTCTGATCCACCAATTCCAATTGGGCAAGCATGTTTCTGA 1158 0.4283 MNCGNLIYALGWLNLCVACTFIQVSFGKASNFSRCWFPAIYNFGDSNSDTGAVSAAFTGVKPPNGISFFGSLSGRASDGRLIIDYMTEELKLPYLSAYLDSVGSNYRHGANFAVGGSSIRPGGYSPFPLGLQVDQFLQFKSRTNILYNQLSDNSCHTFTLMFLTFKSSLPRPEDFSRALYTFDIGQNDLAFGLQHTSQEQVIKSIPDILSQFFQAVQQLYYQGARVFWIHNTGPIGCLPYSYIYYGPKKGNIDANGCVKPHNELAQEFNRQLKDQVFQLRRKFSLAKFTYVDLYTAKYELVSSAKSQGFISPLEFCCGSYYGYHINCGKKAIVNGTVYGNPCKNPFQHVSWDGIHYSQAANQWIAQRILYGSFSDPPIPIGQACF* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01478 385 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 22 377 - -
Lapu4g01478 385 SUPERFAMILY SGNH hydrolase 111 369 - -
Lapu4g01478 385 Pfam GDSL-like Lipase/Acylhydrolase 40 368 IPR001087 GO:0016788
Lapu4g01478 385 Gene3D SGNH hydrolase 28 370 IPR036514 -
Lapu4g01478 385 CDD SGNH_plant_lipase_like 38 372 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01478 Lapu-Chr4 31902667 31905637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01478 37 369 Pollen Coat Proteome AT1G75910 27.089 6.63e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01478 - - gmx:100782272 697.967