Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01475 ATGGCAGAAGATGAATCAAGCACTGATCCTATTACTGTTCCAACCCACACAAAAGCTTGGTACTACTCTGAACATGGTAGCCCAGATGTTCTGAAATTAGATCCTAATTGGCCATTACCACAACTCAAAGATGACCAAGTCCTCATCAAGGTCCTTGCAGCATCCCTTAATCCCATTGATTACAAGAGGATGAACGGCTTGTACAAGAATTATGACCCTCATTTACCTACTGTTCCTGGCTTCGATGTTGCTGGTGTGGTGGTGAGTGTGGGAAGAGAAGTGAATAAATTCAAGGTTGGTGATGAGGTATATGGTGACATCAATGAGGAAGGAGTAACAAACCTAAAGGCCCTTGGAACTTTGTCTGAGTATACTATAGCAGAAGAGAGGCTATTAGCTCTGAAGCCACCAAATCTAAGCTTCATTGAAGCTGCTGCCATTCCTGCTGCAATAGAAACTGCTTATGAAGGCCTTGAACGAGCTGAGTTTTCTGCAGGAAAATCTATTCTTGTTCTGGGAGGAGCTGGTGGAGTTGGTCACTTTGTTATTCAGCTTGCGAAGCATGTTTATGGTGCGTCAAAGATAGCAGCAACTTCTAGCACTGGAAAATTGGAACTTCTAAGAAAGTTGGGAGCTGATTGGGCAATTGATTATACAAAGGAGAACATTGAAGACATAGCAGAAAAGTTTGATGTAGTGTACGACACAATAGGAGAACCTGATAGAGCCCTGAAGGTGGTGAAGGAAGGTGGCAAAGCTGTGACAATACTACCTCCTGGACTTCCACCAGCCATTTTCTTTGCTCTAACTTCTAAAGGCTCCATTTTAGACATGTTGAGACCTTACTTTGAGAATGGTCAAGTGAAGCCATTACTTGATCCAAAGACTCCAGTGCCATTTTCTCAGCTTATTGAAGCCATTTCCTACTTAGAAACTTCAAGAGCCACAGGGAAAGTGGTTGTTTATCCCATACCCAAT 978 0.4284 MAEDESSTDPITVPTHTKAWYYSEHGSPDVLKLDPNWPLPQLKDDQVLIKVLAASLNPIDYKRMNGLYKNYDPHLPTVPGFDVAGVVVSVGREVNKFKVGDEVYGDINEEGVTNLKALGTLSEYTIAEERLLALKPPNLSFIEAAAIPAAIETAYEGLERAEFSAGKSILVLGGAGGVGHFVIQLAKHVYGASKIAATSSTGKLELLRKLGADWAIDYTKENIEDIAEKFDVVYDTIGEPDRALKVVKEGGKAVTILPPGLPPAIFFALTSKGSILDMLRPYFENGQVKPLLDPKTPVPFSQLIEAISYLETSRATGKVVVYPIPN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01475 326 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 11 325 IPR044626 GO:0016628
Lapu4g01475 326 Pfam Alcohol dehydrogenase GroES-like domain 45 106 IPR013154 -
Lapu4g01475 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 139 275 IPR036291 -
Lapu4g01475 326 CDD MDR_like_2 18 321 - -
Lapu4g01475 326 Gene3D - 158 272 - -
Lapu4g01475 326 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 166 187 IPR002364 GO:0008270|GO:0016491
Lapu4g01475 326 SUPERFAMILY GroES-like 17 175 IPR011032 -
Lapu4g01475 326 Pfam Zinc-binding dehydrogenase 210 321 - -
Lapu4g01475 326 Gene3D - 24 321 - -
Lapu4g01475 326 SMART PKS_ER_names_mod 26 321 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01475 Lapu-Chr4 31885146 31886640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01475 72 236 Monolignol Biosynthesis Gene Families AT1G72680 26.562 6.87e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01475 K18980 - gmx:100788619 482.641