Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01473 ATGGCAAGTATTCCATCTCACATAAGAGCTTGGATCTACTCTGAATATGGGCACATAGAAGAGGTTCTCAAGTTTGATCCTAATGTACCTACACCACACCTCAGTGAAAACCAAGTGCTCATCAAAGTTGTGGCTGCAGCCCTTAATCCAGTAGATTATAAGAGAGCTCTTGGTCATTTCAAGGACATTGACTCTCCTTTACCGACTGCACCAGGGTACGATGTTGCTGGTGTGGTGGTGAAAGTGGGAAATCAAGTGAAGAAATTTCAGGTTGGAGATGAAGTGTATGGTGATATCAATGAGATTACTTTGGACCATCCAAAGACTATTGGCTCTTTGGCTGAATATACTGCTGTTGAAGAGAAAGTATTGGCTCACAAACCCTCCAATTTGAGTTTTGTTGAAGCTGCAAGCCTCCCTTTGGCAATCATAACTGCTTATCAAGGACTTGAAACTGCTGAGCTCTCCGCTGGCAAATCTATACTTGTTCTGGGAGGTGCTGGTGGAGTTGGATCCCTTGTTATTCAGATCGCCAAGCATGTGTTTGGTGCATCTAAGATAGCAGCTACTGCTAGTACTGGAAAACTGGAATTGTTGAGAAACTTGGGAGCAGACTTGCCTATTGATTACACAAAAGAGAACTTTGAAGAACTGGCAGAGAAGTTTGATGTGGTGTACGATGCAGTAGGGCAAAGTGAAAGGGCATTGAAGGCTGTTAAAGAAGGTGGTAAAGTTGTGACAATATTGGCACCTGCTACTCCACCAGCTATACCCTTCTTGCTCACTTCTGATGGAGATTTGTTGGAGAAATTGGGACCTTACTTGGAGAGTGGAAAGGTGAAGCCATTATTAGATCCTAAGAGTCCCTTTCCATTTTCTCAGACAGTGGAAGCATTTGCATTCTTGAAGACCAATAGAGCTACTGGGAAACTGGTCATATATCCCATTCCATAA 954 0.4319 MASIPSHIRAWIYSEYGHIEEVLKFDPNVPTPHLSENQVLIKVVAAALNPVDYKRALGHFKDIDSPLPTAPGYDVAGVVVKVGNQVKKFQVGDEVYGDINEITLDHPKTIGSLAEYTAVEEKVLAHKPSNLSFVEAASLPLAIITAYQGLETAELSAGKSILVLGGAGGVGSLVIQIAKHVFGASKIAATASTGKLELLRNLGADLPIDYTKENFEELAEKFDVVYDAVGQSERALKAVKEGGKVVTILAPATPPAIPFLLTSDGDLLEKLGPYLESGKVKPLLDPKSPFPFSQTVEAFAFLKTNRATGKLVIYPIP* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01473 317 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 257 IPR036291 -
Lapu4g01473 317 CDD MDR_like_2 9 313 - -
Lapu4g01473 317 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 158 179 IPR002364 GO:0008270|GO:0016491
Lapu4g01473 317 Gene3D - 150 264 - -
Lapu4g01473 317 Pfam Alcohol dehydrogenase GroES-like domain 37 98 IPR013154 -
Lapu4g01473 317 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 317 IPR044626 GO:0016628
Lapu4g01473 317 Pfam Zinc-binding dehydrogenase 202 313 - -
Lapu4g01473 317 SUPERFAMILY GroES-like 6 163 IPR011032 -
Lapu4g01473 317 Gene3D - 15 313 - -
Lapu4g01473 317 SMART PKS_ER_names_mod 17 313 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01473 Lapu-Chr4 31876942 31878404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01473 36 258 Monolignol Biosynthesis Gene Families AT4G37980 25.296 4.01e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01473 K18980 - gmx:100791274 494.582