Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01468 ATGGTTCATGGAATCACCCATTTGGTTGGAGATGAAGGTGGTTGGACCTTCAATGTCACTAACTGGCCTCAAGGAAAGCAATTTAGTGCTGGGGATGTACTAGAATTTCGTTACAGTCCTTTTTCTCATGACGTGTTGAAAGTTGATGAATTTGGATACAACTCATGCATTCCTTCATTAGGATCAAAAGTTTTCACTTCAGGAGATGATAAGATTCAGCTTGAACAAGGAATCAACTACTTCATCTGTGGTTACCCTTTTCACTGTCAGGGTGGCATGAAAATTGCAATCAATGCTGTGTGA 303 0.4026 MVHGITHLVGDEGGWTFNVTNWPQGKQFSAGDVLEFRYSPFSHDVLKVDEFGYNSCIPSLGSKVFTSGDDKIQLEQGINYFICGYPFHCQGGMKIAINAV* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01468 100 ProSitePatterns Type-1 copper (blue) proteins signature. 77 93 IPR028871 -
Lapu4g01468 100 FunFam basic blue protein-like 5 99 - -
Lapu4g01468 100 SUPERFAMILY Cupredoxins 6 99 IPR008972 -
Lapu4g01468 100 Gene3D - 5 100 IPR008972 -
Lapu4g01468 100 ProSiteProfiles Phytocyanin domain profile. 5 100 IPR003245 GO:0009055
Lapu4g01468 100 CDD Plantacyanin 6 99 IPR041844 -
Lapu4g01468 100 Pfam Plastocyanin-like domain 15 93 IPR003245 GO:0009055
Lapu4g01468 100 PANTHER BLUE COPPER PROTEIN 6 98 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01468 Lapu-Chr4 31843523 31844930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01468 6 100 Phytocyanin Superfamily AT1G17800 42.857 3.73e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01468 - - gmx:100818617 153.68