Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01445 ATGTTGGAGAAGACAATGAAGACATCCAGTACGATGTTTCAGGACAAGCATCATAATCATAACAAAAGAGAGAGATTTCTGGGTCTGACCTTAGGGAAGGGAGTGCCGTTTGTCTTGTCCTCTCTCTTCATGGCTTCGATTTTCTGTTTGTTCTTCCTCTTCAATCCCAACCATTTAACCCTCACACCCCATCAAGGCCATGACCTATTTGAAATTCCCTCACAAAACCAAGAACAGACCATAATCACCACAAAGCCTTCATCATCCCAACCACAAAAGGAACAGAAACCATGTGACCTTTCTAAGGGTCACTGGGTACAAGCATTGGGAGGGTCATCAACCTACTACACCAATTCAAGCTGCCCATCAATCCCTGATAGCAAAAACTGTTTCAGGCATGGGAGAAAAGACAGTGATTTTCTGAATTGGAGATGGAAGCCTGAGCAATGTGAACTTCCAAGGTTTGATCCCAGAACCTTCCTTCACATGGTTCGTGGCAAGAAAATGGCTTTCATTGGTGACTCTGTGGCCAGAAACCACATGGATTCCCTCCTCTGCCTCTTGTCACAGAATGAAATTCCAAATGACATTTACAAGGACTCAGAAGACAGGTTTCGCAAATGGTATTTTCCCGTCCATGACTTCACTCTCATGATGTTGTGGAGCAGATTCCTCATAGTAGGCGAGGAGAGAATGGTAAACGGCACAGGCACCAGCATCTTCGACATGCAGCTAGACAAGGTGGACAGTGATTGGGCCAAAGAGCTCCCCAACTTAGACTACACTGTGATCTCAGATGGACACTGGTTTTTCAGAGGGATGCAGCTGCATGAAGGTGGAGAAAAAGTAGGGTGTGTGTACTGCAACGAACCAAATGTGACAAGCTACAACGTGGATTTCCCCTTTAGAAAAGCATTCAGAACAGCCTTTAGACACATCAATGAGTGTGAAGAATGTAGAAGTAAGAGGATGGTGACAGTGTTGAGGACTTTTGCACCAGCACACTTTGAGAACGGGTTTTGGAACACTGGAGGGTACTGTAATAGGACAGGTCCAATGAGTGAGAGTGAGGTGGATTTTGAGAAGTTTGATTGGCAACTAAGGAATGCTCAAATGGAGGAGTTTGAGAGAGCAAAGAGTGAAGGTGAAGAAAAGGGTCATAGGTTTGAGGTGGTGGATGTTGCAAGAGCCATGCTGATGAGACCAGATGGGCACCCTGGAGAGCATTGGGGGAACAAGTGGATGAGGGGTTACAATGATTGCACTCACTGGTGCTTGCCAGGACCTGTTGATATGTGGAGTGAGTTCTTGCTTGCTGTGCTAAAAAAAGTGGCTGCTTCTGATCTTAATCAGTGCGATTCGATGTCGCAAGGGTTCGCAATCGAACTGTACTTGGATCCGGCGTTGGAGAATCAGGTGCTGAAGGCTTGGAACGTTCTCGCCCGGCGACAAATCACCACTCACCTCATCGAGATGGAATCGCGTCCTCACATAACTCTCTTCTCCGCCCCCTTTCTAGAACCTTCCAAGCTCGAATCGCTTCTCAGAACCTTCGCATCCAAACATGATCCTCTCTCACTCTCTTTCTCCTCCGTCGGCACCTTCCCCAACGATGCCGACAACCTCCTCTTCCTGGTCCCAACCCCCTCCCTCTCGCTCCTCCAATTCCAGTCGCACCTCTGCGACGCTATCAGAAAAGAAGGTGTTGAGATCTCCGACGATTTTGCCTTCAATTCCTGGATACCGTACTGCTCTGTCGCCCACCATGTCCCCAAAAACAGAATGCCGGAGGCTTTCTCCCTCTTGCGGGAACTCAAACTGCCGGTTTCCGGTTACGCCACGGACATCGCGCTCGTGCAGTTCTCTCCGGTTCGCGAACTCTTCTCTTTTGTGCTCGGCAACAATAGTTGA 1911 0.4814 MLEKTMKTSSTMFQDKHHNHNKRERFLGLTLGKGVPFVLSSLFMASIFCLFFLFNPNHLTLTPHQGHDLFEIPSQNQEQTIITTKPSSSQPQKEQKPCDLSKGHWVQALGGSSTYYTNSSCPSIPDSKNCFRHGRKDSDFLNWRWKPEQCELPRFDPRTFLHMVRGKKMAFIGDSVARNHMDSLLCLLSQNEIPNDIYKDSEDRFRKWYFPVHDFTLMMLWSRFLIVGEERMVNGTGTSIFDMQLDKVDSDWAKELPNLDYTVISDGHWFFRGMQLHEGGEKVGCVYCNEPNVTSYNVDFPFRKAFRTAFRHINECEECRSKRMVTVLRTFAPAHFENGFWNTGGYCNRTGPMSESEVDFEKFDWQLRNAQMEEFERAKSEGEEKGHRFEVVDVARAMLMRPDGHPGEHWGNKWMRGYNDCTHWCLPGPVDMWSEFLLAVLKKVAASDLNQCDSMSQGFAIELYLDPALENQVLKAWNVLARRQITTHLIEMESRPHITLFSAPFLEPSKLESLLRTFASKHDPLSLSFSSVGTFPNDADNLLFLVPTPSLSLLQFQSHLCDAIRKEGVEISDDFAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYATDIALVQFSPVRELFSFVLGNNS* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01445 636 Gene3D Cyclic phosphodiesterase 459 633 - -
Lapu4g01445 636 SUPERFAMILY LigT-like 459 618 IPR009097 -
Lapu4g01445 636 Pfam PMR5 N terminal Domain 97 151 IPR025846 -
Lapu4g01445 636 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 152 439 IPR026057 GO:0016740
Lapu4g01445 636 Pfam 2'-5' RNA ligase superfamily 495 620 - -
Lapu4g01445 636 PANTHER - 455 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01445 Lapu-Chr4 31617631 31626583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01445 455 635 Calmodulin-binding Proteins AT5G40190 63.536 9.12e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01445 K23877 - gmx:100806002 775.007