Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01429 ATGGATTTGTTCCTTGTGAGTACCCTAAACACCACTGCACTTGCTCTCTTTTTCCTCACATCACTCTTAGCTTTCTCTTTGTTTCTCTGTCGTCCCTCCAAAGCTGGTACTAATCTGAGAGAGCCTCCAATGGCCTCGCGTGCATGGCCCATACTCGGCCACCTCACGCTTCTCGGTGGCTCCCCAACACCCCACAAGACGTTGGCAGCCATGGCAGACAAATATGGACCTCTCTTCACCATCAAGCTCGGTTCCAATCGCGCTTTGGTTCTCAGCAACTGGAAAATGGCCAAGGAATGTTACACCACAAACGACGTCGTCGTCTCCTCTCGCTCCAAGCTCGTGGCCATCGAACACGTCGCATATAACCAAGCCAGCTTTGGCTTCGCACCCTATGGTCCTTACTGGCGTGAGATACGGAAGATCGTCACCGTGTTCCTCTCCAACCGCAAAACGGAGCTTCTAAGCCGCGTTAGACTTTCTGAGATTCGAAGTTCTGTTAAAGAGCTCTTTCATGTTTGGTCGGAGAAGAAGGGCAGTGATGAGTGTAAAACCGCAGTGGTTAGTGAGAAAGAAGCAGAGAAGTGTGTGAAGGCTTTGAGGGACTTCATGCACATGTTGGGGGTGTGCACAGTGGCTGATGCTGTTCCTGTTCTGAGGTGGATGAATGTGGGAGTGAAAGCCATGAAAGAAACTGCCAAAGAATTGGATGTGATCTTAGATGAGTGGTTGGTGGAGCACAGCCAAAAGAGGGCTTTAGGTGAAAAGGGTGTTCAAAGTGACGACCAAGACTTCATGGATATGATGCTTTCTGTGCTTGATGGTGCCACCATCGATGGCTTCGATGCTGCTACTATAAACAAAGCCACAACATTGGCACTGATCTTGGGTGCCACTGATACAAGCACAGTTACTCTTACATGGGTGGTGTGTTTCTTACTGAAAAATCCTCTTGTATTAGAAAAAGTAAAAGAAGAGATCAACACTCAAATTGGGGAAGATAGATTCATTAGTGAGTCAGATGTAAACAAGTTAGTATACCTTCAAGCAGTAGTGAAAGAGACACTGAGGCTGTATCCACCAGGTCCTCTCTCAGCACCTCGTGAATTCACAGAAGATTGCATGTTAGGTGGCTATCATATAAAAAAGGGAACTCGATTAATCACAAACCTGTGGAAGATCCAAACTGATCCTAGTATTTGGTCGGATCCATTGAAGTTCAAGCCAGAAAGATTCCTTACAACTCACAGAGATGTTGATGTTAAGGGTCAAAATTTTGAGTTGTTACCATTTGGAAGTGGCAGAAGAATATGTCCAGGAATATCCTTTGGCCTTAACATGATTCATTTAACTCTGGCTAATCTTTTGCACTCTTTTGAAATATTTAATAAATCCAATGAACCTATTGATATGAGTGAAGCCCTTGGAATGACTAATGAAAAAGCTACTCCACTTGAGATTCTTGTTAAGCCACGTTTGTCTTCAAAGTATTATGAATCCATGTGA 1506 0.4475 MDLFLVSTLNTTALALFFLTSLLAFSLFLCRPSKAGTNLREPPMASRAWPILGHLTLLGGSPTPHKTLAAMADKYGPLFTIKLGSNRALVLSNWKMAKECYTTNDVVVSSRSKLVAIEHVAYNQASFGFAPYGPYWREIRKIVTVFLSNRKTELLSRVRLSEIRSSVKELFHVWSEKKGSDECKTAVVSEKEAEKCVKALRDFMHMLGVCTVADAVPVLRWMNVGVKAMKETAKELDVILDEWLVEHSQKRALGEKGVQSDDQDFMDMMLSVLDGATIDGFDAATINKATTLALILGATDTSTVTLTWVVCFLLKNPLVLEKVKEEINTQIGEDRFISESDVNKLVYLQAVVKETLRLYPPGPLSAPREFTEDCMLGGYHIKKGTRLITNLWKIQTDPSIWSDPLKFKPERFLTTHRDVDVKGQNFELLPFGSGRRICPGISFGLNMIHLTLANLLHSFEIFNKSNEPIDMSEALGMTNEKATPLEILVKPRLSSKYYESM* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01429 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Lapu4g01429 501 SUPERFAMILY Cytochrome P450 47 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 FunFam Cytochrome P450 82C4 182 490 - -
Lapu4g01429 501 Pfam Cytochrome P450 46 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 CDD CYP82 76 492 - -
Lapu4g01429 501 Gene3D Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01429 501 PANTHER CYTOCHROME P450 82C3-RELATED 23 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01429 Lapu-Chr4 31426182 31429389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01429 43 498 Cytochrome P450 AT4G31940 45.436 2.42e-155 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01429 - - pvu:PHAVU_004G021100g 913.679