Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01428 ATGGACTTTCTCCTAAATTTCTTAAGCTTAAACACCACCACTCTTATTGCATCGTTTCTTTCTCTAATCTTCCTATTTTTCTGTCTATATCGTAGAAATTCTCGTGGAAAACAGGCTCCAATAGTGAAAGGTGCATGGCCAATACTTGGTCATCTTTCACTGTTGAATGGCTCACAAACACCCCACAGAACATTGGGTGCTTTGGCTGACAAGTATGGACCCTTGTTCACCATCAAGCTTGGTGTCAAAGAGGCTTTGGTGCTCAGCAACTGGGAAATGTCCAGGGAACTCTTCACCACAAACGACCTTGCCGTTTCGTCACGCCCTAAACTCGTTGCCGTGGAAGTCATGTCCTACAACCAAGCCTTCGTAGGGTTGGCACCATACGGGCCCTATTGGCGAGAGCTTCGAAAGATTGTGACTTTTGAGTTTCTCTCCAACCGCAGAATAGAACAACTCAGCCACATTCGTGTCTCAGAGGTTCAAACCTCAGTCAAAGAGCTAAGCAATTTTTGCTATACTAGTGTAAACAACAAGAGCAAGAAGGAGAACGAATATAGTTATACTACTGCTACTTTGGTGGACATGAAAGAGTGGTTTGGACATTTGAGTTTCAACACGGTAGTGAGGATGGTGGTGGGAAAGAGGTACTTTGGTGTGGTGCATGTGGAGGGAAAGGAGAAGGCAGAAAGGTTTATGAAGAATATAAGGGAGTTCATGAATTTGATGGGGACCTTCACTGTGGCTGACGGGGTTCCTTGTTTGAGGTGGTTGGATTTGGGGGGCTATGAGAAGGCCATGAAAGCAACGGCTAAGGAAATGGACAGGCTGTTGAGTGAGTGGTTGGAGGAGCACCGTGAGAAGAAGGGTTTGGGTGGAAAGGATAAGGGAGATCAAGACTTCATGGATGTGATGATTTCAGCACTTAATGGGGCTCAGATTGATGGGTTTGATGCTGATACCATATGCAAAGCCACTACTCTCGAATTGATTTTGGGTGGCACTGATTCAACTGCTGTTACTCTTACATGGGCCCTTAGTCTGCTATTGCGAAATCCTCTTGCAATGGAAAAGGCTAAACAAGAAATTGACATGCATATTGGCAAAGATGGATACATAAGAGAGTCAGATATAAGCAAACTTGTGTATCTTCAAGCCATAGTTAAAGAGACATTGAGATTGTATCCACCAGCACCTCTTTCATCACCACGTGAATTCACAGAAAATTGCACCTTAGGTGGCTACCACATCAAAAAGGGAACTCGACTAATGCACAACTTGTGGAAGATCCAGAGAGACCCTAGTGTTTGGTCGGATCCATTAGAATTCAAACCAGAAAGATTCCTCACCTCTCACAAACACGTTGATCTGAGGGGTAGGCATTTTGAGTTGTTACCCTTTGGAAGTGGGAGAAGAATGTGTGCGGGAATGTCCCTTGGCTTACACATGGTGCATTTCACTTTGGCTAGTGTGCTGCATTCCTTTGACATCTCGAATCCTTCAGCTGAACCTATTGATATGACTGAGTTGTTTGAATTTACAAACACCAGAGCTACTCCACTTGAGGTTTTGGTTAAGCCACGCCTATCTCCAAACTATTATGAAGCTTTGTAA 1614 0.4424 MDFLLNFLSLNTTTLIASFLSLIFLFFCLYRRNSRGKQAPIVKGAWPILGHLSLLNGSQTPHRTLGALADKYGPLFTIKLGVKEALVLSNWEMSRELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQLSHIRVSEVQTSVKELSNFCYTSVNNKSKKENEYSYTTATLVDMKEWFGHLSFNTVVRMVVGKRYFGVVHVEGKEKAERFMKNIREFMNLMGTFTVADGVPCLRWLDLGGYEKAMKATAKEMDRLLSEWLEEHREKKGLGGKDKGDQDFMDVMISALNGAQIDGFDADTICKATTLELILGGTDSTAVTLTWALSLLLRNPLAMEKAKQEIDMHIGKDGYIRESDISKLVYLQAIVKETLRLYPPAPLSSPREFTENCTLGGYHIKKGTRLMHNLWKIQRDPSVWSDPLEFKPERFLTSHKHVDLRGRHFELLPFGSGRRMCAGMSLGLHMVHFTLASVLHSFDISNPSAEPIDMTELFEFTNTRATPLEVLVKPRLSPNYYEAL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01428 537 FunFam Cytochrome P450 82C4 29 526 - -
Lapu4g01428 537 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 Pfam Cytochrome P450 45 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Lapu4g01428 537 CDD CYP82 73 528 - -
Lapu4g01428 537 Gene3D Cytochrome P450 30 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01428 537 PANTHER CYTOCHROME P450 82C3-RELATED 19 534 - -
Lapu4g01428 537 SUPERFAMILY Cytochrome P450 45 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01428 Lapu-Chr4 31422366 31424157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01428 13 534 Cytochrome P450 AT4G31940 47.180 5.07e-174 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01428 - - gmx:100789386 875.159