Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01427 AATGGGGCTCAAATTGATGGGTTTGATGCTGATACCATATGCAAAGCCACTACCCTGGAATTGATTTTGGGTGGAACCGATACAACTGCTGTTACTCTTACATGGGCACTTAGTCTGCTATTGCGAAATCCTCTTGCAATGGAAAAGGCTAAACAAGAAATTGACATGCATATTGACAAAGATGGATACATAAGAGAGTCAGATACAAGCAAACTTGTGTATCTTCATGCTATAGTTAAAGAGACATTAAGATTGTATCCACCAGCACCCCTTTCATCACCTCGTGAATTCGCAGAAAATTGCATATTGGGTGGCTACCACGTCAAAAAGGGAACTCAACTACTGCATAACTTGTGGAAGTTGCACAGAGACCCTAGTGTTTGGTCTGATCCATTAGAATTTAAACCAGAAAGGTTCCTCACCACTCACAAACATGTTGATCTTAGGGGTCACCATTTTGAGTTGTTACCCTTTGGAAGTGGGAGAAGAATTTGTGCTGGAATGTCCCTTGGCTTACACCTAATCCATTTCACTTTGGCTAATTTGTTGCATTCATTTGACATCTTGAATCCTTCGTCCGAACCTATTGATATGACTGAGTTCTTTGGATTTACCAACACTAGAGCTACTCCACTTGAGGTTTTGATTAAACCACGTCTATCTCCAAACTATTATGAAGCTTTA 684 0.4035 NGAQIDGFDADTICKATTLELILGGTDTTAVTLTWALSLLLRNPLAMEKAKQEIDMHIDKDGYIRESDTSKLVYLHAIVKETLRLYPPAPLSSPREFAENCILGGYHVKKGTQLLHNLWKLHRDPSVWSDPLEFKPERFLTTHKHVDLRGHHFELLPFGSGRRICAGMSLGLHLIHFTLANLLHSFDILNPSSEPIDMTEFFGFTNTRATPLEVLIKPRLSPNYYEAL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01427 228 Pfam Cytochrome P450 14 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 Gene3D Cytochrome P450 5 221 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS E-class P450 group I signature 165 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS E-class P450 group I signature 33 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS E-class P450 group I signature 76 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS E-class P450 group I signature 155 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS E-class P450 group I signature 13 30 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS E-class P450 group I signature 117 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 SUPERFAMILY Cytochrome P450 12 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS P450 superfamily signature 77 88 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS P450 superfamily signature 24 41 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS P450 superfamily signature 156 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PRINTS P450 superfamily signature 165 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01427 228 PANTHER CYTOCHROME P450 82C3-RELATED 7 225 - -
Lapu4g01427 228 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 158 167 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01427 Lapu-Chr4 31416448 31417346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01427 8 225 Cytochrome P450 AT4G31940 53.425 1.25e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01427 - - gmx:100779366 426.787