Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01426 ATGGATCTAAATGTCTCTGCAATTGGACTTGTTTCTCTAATCCTCTTCTGCTTCTTTTTCTATAGTCTCTTCAAATTTTCTCAAGGAAAAGAGGCTCCCACTGTCGCAGGTGCATGGCCAGTACTTGGCCACCTTCCATTGTTGAGTGGTTCAAAGACACCCCATAGAACTTTGGGTGCTTTGGCTGACAAATATGGACCAATATTCATCATCAAACTTGGTGTCAAAAAGGCTTTGGTAATCAACAACTGGGAAATGGCAAAGGAATGCTTCACAACAAACGACATAGTCGTTTCTTCTCGCCCCAAGCTTATTGCCATTGAACACATGAGCTACAACCAAGCCATGTTTGGCTTAGCCCCCTATGGTCCCTATTGGCGAAAGCTAAGAAAGATTACAAGTTCAGAGATCCTCTCCCCTCACCGAGTGAAGCAACTACATCATGTTTTTGAATCAGAAGTTCAAGGTTCGATCAAGGAGCTCTTTAACTTTTGGTGTAGCAAAAAGAATGAGTGCGGCTATGCCTTGGTGGAGTTGAAGCAATGGTTCTCTCATTTGATTTTCAACATTGTTCTTCAAATGGTTATAGGGAAGCGATATTTTAGTGCAACAACTGTGGATGATGAGAAGGCACAGAGATGTGTTAAGGCCGTGGATGAATTCATGCGTCTGTTGGGGGTGTTCGTAGTGGGAGATGCTATTCCTTGGCTGAGATGGTTTGATTTTGGAGGCCATGAGAAGGCGATGAAAGAAACTGCGAAAGAATTGGATAGTATTGTAGGTGAGTGGTTAGAGGAACATAGACAAAACAAGTCTTTGAGGGAGAAGGTTGATGGAGTTGAGGATGTCATGGATGTGATGATTTCCTTGCTTGACGGAACAATTATTGATGGGGTCGATGCAGATACCATGATTAAATCTATTGTACTGACAATAATTTCAGCAGCAACTGAAACAATTATTACTACTCTTACATGGGCAATGTGTTTAATCTTAAGAAATCCAGATGTATTAGAAAAAGTTAAGGAAGAGCTTTACAAAGTTGGAAAAGAGAAATGCATAAGTGAGGATGTCATTAGTAGATTAGTATATCTTCAAGCTATAGTCAAAGAAACGTTAAGACTGTATCCTCCAACTCCTCTCTCTGCACCTCATGAGTTTACAGAGAATTGTACTATAAATGGCTACAACGTCACAAAGGGAACTCGTCTGATTACAAATCTTTGGAAAATCCACACAGATCGATATGTTTGGCCAGATCCATTAGAGTTCAAACCAGAAAGATTTCTTACAACTCATAAAGATGTTGACATGAGGGGTCATCATTTTGAGCTATTACCATTTGGAGGAGGTAGAAGGATTTGTCCTGGAATATCTTTTGGCCTTCAAGTTGTTGTTCATTTAACTCTTGCTAATTTTTTACATTATTTTGAAATCTTAAATCCATCAAATGAACCTCTTGATATGACGGAAACTTTTGGATTAACCAACACTAAAACCACTCCACTTGATATTTTGGTCAAACCATGTCTGTCTCCTAATTGTTAA 1548 0.3947 MDLNVSAIGLVSLILFCFFFYSLFKFSQGKEAPTVAGAWPVLGHLPLLSGSKTPHRTLGALADKYGPIFIIKLGVKKALVINNWEMAKECFTTNDIVVSSRPKLIAIEHMSYNQAMFGLAPYGPYWRKLRKITSSEILSPHRVKQLHHVFESEVQGSIKELFNFWCSKKNECGYALVELKQWFSHLIFNIVLQMVIGKRYFSATTVDDEKAQRCVKAVDEFMRLLGVFVVGDAIPWLRWFDFGGHEKAMKETAKELDSIVGEWLEEHRQNKSLREKVDGVEDVMDVMISLLDGTIIDGVDADTMIKSIVLTIISAATETIITTLTWAMCLILRNPDVLEKVKEELYKVGKEKCISEDVISRLVYLQAIVKETLRLYPPTPLSAPHEFTENCTINGYNVTKGTRLITNLWKIHTDRYVWPDPLEFKPERFLTTHKDVDMRGHHFELLPFGGGRRICPGISFGLQVVVHLTLANFLHYFEILNPSNEPLDMTETFGLTNTKTTPLDILVKPCLSPNC* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01426 515 PANTHER CYTOCHROME P450 82C3-RELATED 14 514 - -
Lapu4g01426 515 FunFam Cytochrome P450 82C4 24 508 - -
Lapu4g01426 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Lapu4g01426 515 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 Pfam Cytochrome P450 36 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 CDD CYP82 66 510 - -
Lapu4g01426 515 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01426 515 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01426 Lapu-Chr4 31411377 31413279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01426 15 509 Cytochrome P450 AT4G31940 45.365 3.36e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01426 - - gmx:100803451 773.852