Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g01425 ATGGATTTTGTTCTAGATTACCTGAATACCACTACCATTGGACTTCTCTCTCTAATCCTCTTCTGTTTATTTTTGCACAATATTCCCTTCAAATTTTTTCAGCCTAAAGAGCCTCCTACAGTTGCAGGATCATGGCCAATACTTGGTCACCTTCCATTGTTGGGTGCTTCAAACACACCGCATAGAACTTTGGGTGCTTTGGCTGAAAAATATGGACCCATATTCACCATCCAACTTGGTTCCAAAAAGGTTTTGGTAATCAACAACTGGGAAATAGCAAAGGAATGCTTCACCACAAACGACATGGCCGTTTCCTCTCGCCCTAAGCTTGTTGCAGTTGAACTCATGGGCTACAACCATGCCATGTTTGGCTTTGCACCCTATGGTCCCTATTGGCGTGAACTAAGAAGGATTGCAACGTTAGAGATCCTCACCAATCACCGAGTGAAGCAGCTACAGCATGTTAGAGTCTCAGAAGTTCAGAACTCCATCAAAGAGCTTTATGATCTCTGGTGTAGCAGAAAGAATGAGTGTGGCTATGCCTTGGTGGAGCTGAAGCAATGGTTCTCTCACTTGGCATTCAACATGGTTCTTCGAATGGTCGTTGGGAAGAGATATTTTGGTGTTGAAAACGTGGACGATGAGAAAGCACAGAGATGTGTGAAGGCCGTGGAGGAGTTCATGCGTCTGTTGGGGGTGTTCGCAGTGGGAGATGCTATTCCTTGGCTGAGATGGTTTGATTTTGGAGGGCATGAGAAGGCAATGAAAGAAATAGCGAAAGAATTGGATAGTATTATAGGTGAGTGGTTAGAGGAACATAGACAAAACAAGGCTTTGGGTGAGAAGGTTGATGGAGTTGAAGATTTCATGGATGTGATGATTTCCTTGCTTGATGGAAGAACTATTGATGGGGTCGATGCAGATACCATGATCAAATCCACTGTACTGGTAGTGATCACAGGAGGAACAGACACAACTAATACTCTTCTTACATGGGCAATATGTTTGATTTTGAGAAATCCTTTGACATTGGAAAAGGTAAAAGCTGAACTAGACATTGAAGTTGGAAAAGGGAGATGCATAAGTGAGTCTGATATAAGTAAGTTAACATACCTTCAAGCCATAGTCAAAGAAACTTTAAGATTGTATCCTCCTGGTCCTCTTTCGGGACCTCGTGAATTTACTGATAATTGCACTTTAAGTGGTTATAATATAAAAAAAGGAACTCGTCTAATTACAAACTTGTGGAAGATTCACACGGATGACAATGTTTGGGAAGATCCATTAGAGTTCAAGCCAGAAAGGTTTTTTACAACTCACAAAGATATTGATATCAAAGGTCATCATTTTGAGCTATTACCATTTGGAGGGGGTAGAAGAATTTGTCCTGGAATAACCTTTGGCCTTCAAATGGTGCATTTCACTCTTGCTAGTTTTTTGCATTCTTTTGAAATTTCAAGTCCATCACCTGATCTTATTGATATGACAGAAACCTTTGGACTAACCAACACTAAAACCACTCCACTTGAGATTCTTATTAAACCTCATTTATAG 1554 0.408 MDFVLDYLNTTTIGLLSLILFCLFLHNIPFKFFQPKEPPTVAGSWPILGHLPLLGASNTPHRTLGALAEKYGPIFTIQLGSKKVLVINNWEIAKECFTTNDMAVSSRPKLVAVELMGYNHAMFGFAPYGPYWRELRRIATLEILTNHRVKQLQHVRVSEVQNSIKELYDLWCSRKNECGYALVELKQWFSHLAFNMVLRMVVGKRYFGVENVDDEKAQRCVKAVEEFMRLLGVFAVGDAIPWLRWFDFGGHEKAMKEIAKELDSIIGEWLEEHRQNKALGEKVDGVEDFMDVMISLLDGRTIDGVDADTMIKSTVLVVITGGTDTTNTLLTWAICLILRNPLTLEKVKAELDIEVGKGRCISESDISKLTYLQAIVKETLRLYPPGPLSGPREFTDNCTLSGYNIKKGTRLITNLWKIHTDDNVWEDPLEFKPERFFTTHKDIDIKGHHFELLPFGGGRRICPGITFGLQMVHFTLASFLHSFEISSPSPDLIDMTETFGLTNTKTTPLEILIKPHL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g01425 517 SUPERFAMILY Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 Pfam Cytochrome P450 43 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PANTHER CYTOCHROME P450 82C3-RELATED 34 517 - -
Lapu4g01425 517 CDD CYP82 72 515 - -
Lapu4g01425 517 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 FunFam Cytochrome P450 82C4 32 514 - -
Lapu4g01425 517 Gene3D Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g01425 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g01425 Lapu-Chr4 31402521 31405428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g01425 39 517 Cytochrome P450 AT4G31940 49.281 1.79e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g01425 - - gmx:100805047 834.713